RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 PCLOQ9Y6V0 5065 aa1.92□□□□□ -2.1
PCDH18-201ENST00000344876 HERC1Q15751 4861 aa1.92□□□□□ -2.1
PCDH18-201ENST00000344876 PKHD1P08F94 4074 aa1.92□□□□□ -2.1
PCDH18-201ENST00000344876 EPPK1P58107 5090 aaKnown RBP1.91□□□□□ -2.1
PCDH18-201ENST00000344876 RYR2Q92736 4967 aa1.91□□□□□ -2.1
PCDH18-201ENST00000344876 KRTAP4-6Q9BYQ5 205 aa1.9□□□□□ -2.11
PCDH18-201ENST00000344876 LCE4AQ5TA78 99 aa1.89□□□□□ -2.11
PCDH18-201ENST00000344876 HYDINQ4G0P3 5121 aa1.89□□□□□ -2.11
PCDH18-201ENST00000344876 LCE5AQ5TCM9 118 aa1.88□□□□□ -2.11
PCDH18-201ENST00000344876 LCE1AQ5T7P2 110 aa1.88□□□□□ -2.11
PCDH18-201ENST00000344876 OBSCNQ5VST9 7968 aa1.87□□□□□ -2.11
PCDH18-201ENST00000344876 KRTAP19-2Q3LHN2 52 aa1.85□□□□□ -2.11
PCDH18-201ENST00000344876 KRTAP9-7A8MTY7 169 aa1.84□□□□□ -2.11
PCDH18-201ENST00000344876 KRTAP2-3P0C7H8 128 aa1.84□□□□□ -2.12
PCDH18-201ENST00000344876 KRTAP2-4Q9BYR9 128 aa1.84□□□□□ -2.12
PCDH18-201ENST00000344876 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.12
PCDH18-201ENST00000344876 MUC2Q02817 5179 aa1.83□□□□□ -2.12
PCDH18-201ENST00000344876 PKHD1L1Q86WI1 4243 aa1.83□□□□□ -2.12
PCDH18-201ENST00000344876 UBR4Q5T4S7 5183 aa1.82□□□□□ -2.12
PCDH18-201ENST00000344876 TNXBP22105 4242 aa1.82□□□□□ -2.12
PCDH18-201ENST00000344876 LCE1EQ5T753 118 aa1.82□□□□□ -2.12
PCDH18-201ENST00000344876 MUC17Q685J3 4493 aa1.82□□□□□ -2.12
PCDH18-201ENST00000344876 KRTAP19-7Q3SYF9 63 aa1.81□□□□□ -2.12
PCDH18-201ENST00000344876 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
PCDH18-201ENST00000344876 FLGP20930 4061 aaPredicted RBP1.81□□□□□ -2.12
PCDH18-201ENST00000344876 MT1AP04731 61 aa1.79□□□□□ -2.12
PCDH18-201ENST00000344876 LCE1FQ5T754 118 aa1.79□□□□□ -2.12
PCDH18-201ENST00000344876 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
PCDH18-201ENST00000344876 ABCA13Q86UQ4 5058 aa1.77□□□□□ -2.13
PCDH18-201ENST00000344876 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
PCDH18-201ENST00000344876 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
PCDH18-201ENST00000344876 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
PCDH18-201ENST00000344876 KRTAP20-1Q3LI63 56 aa1.76□□□□□ -2.13
PCDH18-201ENST00000344876 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
PCDH18-201ENST00000344876 KRTAP2-2Q9BYT5 123 aa1.75□□□□□ -2.13
PCDH18-201ENST00000344876 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
PCDH18-201ENST00000344876 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.73□□□□□ -2.13
PCDH18-201ENST00000344876 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
PCDH18-201ENST00000344876 FAT4Q6V0I7 4981 aa1.7□□□□□ -2.14
PCDH18-201ENST00000344876 KRTAP9-4Q9BYQ2 154 aa1.69□□□□□ -2.14
PCDH18-201ENST00000344876 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
PCDH18-201ENST00000344876 KRTAP6-3Q3LI67 103 aa1.67□□□□□ -2.14
PCDH18-201ENST00000344876 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
PCDH18-201ENST00000344876 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
PCDH18-201ENST00000344876 MACF1Q9UPN3 7388 aaKnown RBP1.63□□□□□ -2.15
PCDH18-201ENST00000344876 USH2AO75445 5202 aa1.62□□□□□ -2.15
PCDH18-201ENST00000344876 KRTAP4-11Q9BYQ6 195 aa1.6□□□□□ -2.15
PCDH18-201ENST00000344876 KMT2DO14686 5537 aa1.59□□□□□ -2.15
PCDH18-201ENST00000344876 KRTAP9-9Q9BYP9 154 aa1.52□□□□□ -2.17
PCDH18-201ENST00000344876 KRTAP4-12Q9BQ66 201 aa1.52□□□□□ -2.17
PCDH18-201ENST00000344876 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
PCDH18-201ENST00000344876 KRTAP5-3Q6L8H2 238 aa1.5□□□□□ -2.17
PCDH18-201ENST00000344876 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
PCDH18-201ENST00000344876 SSPOA2VEC9 5147 aa1.49□□□□□ -2.17
PCDH18-201ENST00000344876 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
PCDH18-201ENST00000344876 NEBP20929 6669 aa1.46□□□□□ -2.18
PCDH18-201ENST00000344876 KRTAP4-2Q9BYR5 136 aa1.43□□□□□ -2.18
PCDH18-201ENST00000344876 MUC12Q9UKN1 5478 aa1.39□□□□□ -2.19
PCDH18-201ENST00000344876 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
PCDH18-201ENST00000344876 KRTAP5-9P26371 169 aa1.35□□□□□ -2.19
PCDH18-201ENST00000344876 MDN1Q9NU22 5596 aa1.33□□□□□ -2.2
PCDH18-201ENST00000344876 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
PCDH18-201ENST00000344876 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
PCDH18-201ENST00000344876 KRTAP5-4Q6L8H1 288 aa1.16□□□□□ -2.22
PCDH18-201ENST00000344876 HMCN1Q96RW7 5635 aa1.12□□□□□ -2.23
PCDH18-201ENST00000344876 KRTAP5-7Q6L8G8 165 aa1.09□□□□□ -2.23
PCDH18-201ENST00000344876 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
PCDH18-201ENST00000344876 MUC5BQ9HC84 5762 aaPredicted RBP1.06□□□□□ -2.24
PCDH18-201ENST00000344876 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
PCDH18-201ENST00000344876 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
PCDH18-201ENST00000344876 KRTAP5-8O75690 187 aa1□□□□□ -2.25
PCDH18-201ENST00000344876 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
PCDH18-201ENST00000344876 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
PCDH18-201ENST00000344876 KRTAP5-1Q6L8H4 278 aa0.95□□□□□ -2.26
PCDH18-201ENST00000344876 KRTAP5-11Q6L8G4 156 aa0.9□□□□□ -2.27
PCDH18-201ENST00000344876 KRTAP21-2Q3LI59 83 aa0.8□□□□□ -2.28
PCDH18-201ENST00000344876 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 92 ms