RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
LYSMD4-202ENST00000344791 KRTAP2-3P0C7H8 128 aa6.38□□□□□ -1.39
LYSMD4-202ENST00000344791 KRTAP2-4Q9BYR9 128 aa6.38□□□□□ -1.39
LYSMD4-202ENST00000344791 KRTAP2-1Q9BYU5 128 aa6.38□□□□□ -1.39
LYSMD4-202ENST00000344791 CRCT1Q9UGL9 99 aa6.38□□□□□ -1.39
LYSMD4-202ENST00000344791 MT1GP13640 62 aa6.33□□□□□ -1.4
LYSMD4-202ENST00000344791 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
LYSMD4-202ENST00000344791 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
LYSMD4-202ENST00000344791 MT1MQ8N339 61 aa6.18□□□□□ -1.42
LYSMD4-202ENST00000344791 KRTAP19-3Q7Z4W3 81 aa6.17□□□□□ -1.42
LYSMD4-202ENST00000344791 SPRR2FQ96RM1 72 aa6.12□□□□□ -1.43
LYSMD4-202ENST00000344791 MACF1Q9UPN3 7388 aaKnown RBP6.12□□□□□ -1.43
LYSMD4-202ENST00000344791 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
LYSMD4-202ENST00000344791 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
LYSMD4-202ENST00000344791 MDN1Q9NU22 5596 aa5.98□□□□□ -1.45
LYSMD4-202ENST00000344791 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
LYSMD4-202ENST00000344791 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
LYSMD4-202ENST00000344791 KRTAP12-4P60329 112 aa5.82□□□□□ -1.48
LYSMD4-202ENST00000344791 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
LYSMD4-202ENST00000344791 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
LYSMD4-202ENST00000344791 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
LYSMD4-202ENST00000344791 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
LYSMD4-202ENST00000344791 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
LYSMD4-202ENST00000344791 KRTAP9-6A0A140TA67 174 aa5.55□□□□□ -1.52
LYSMD4-202ENST00000344791 SPRR2EP22531 72 aa5.53□□□□□ -1.52
LYSMD4-202ENST00000344791 SPRR2BP35325 72 aa5.53□□□□□ -1.52
LYSMD4-202ENST00000344791 SPRR2AP35326 72 aa5.53□□□□□ -1.52
LYSMD4-202ENST00000344791 MT1AP04731 61 aa5.48□□□□□ -1.53
LYSMD4-202ENST00000344791 KRTAP5-9P26371 169 aa5.42□□□□□ -1.54
LYSMD4-202ENST00000344791 LCE3DQ9BYE3 92 aa5.41□□□□□ -1.54
LYSMD4-202ENST00000344791 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
LYSMD4-202ENST00000344791 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
LYSMD4-202ENST00000344791 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
LYSMD4-202ENST00000344791 SPRR2DP22532 72 aa5.26□□□□□ -1.57
LYSMD4-202ENST00000344791 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
LYSMD4-202ENST00000344791 PRM1P04553 51 aa5.16□□□□□ -1.58
LYSMD4-202ENST00000344791 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
LYSMD4-202ENST00000344791 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
LYSMD4-202ENST00000344791 MT3P25713 68 aa4.95□□□□□ -1.62
LYSMD4-202ENST00000344791 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
LYSMD4-202ENST00000344791 MT4P47944 62 aa4.79□□□□□ -1.64
LYSMD4-202ENST00000344791 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
LYSMD4-202ENST00000344791 NEBP20929 6669 aa4.68□□□□□ -1.66
LYSMD4-202ENST00000344791 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
LYSMD4-202ENST00000344791 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
LYSMD4-202ENST00000344791 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
LYSMD4-202ENST00000344791 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
LYSMD4-202ENST00000344791 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
LYSMD4-202ENST00000344791 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
LYSMD4-202ENST00000344791 KRTAP20-1Q3LI63 56 aa4.36□□□□□ -1.71
LYSMD4-202ENST00000344791 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
LYSMD4-202ENST00000344791 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
LYSMD4-202ENST00000344791 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
LYSMD4-202ENST00000344791 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
LYSMD4-202ENST00000344791 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.77
LYSMD4-202ENST00000344791 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
LYSMD4-202ENST00000344791 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
LYSMD4-202ENST00000344791 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
LYSMD4-202ENST00000344791 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
LYSMD4-202ENST00000344791 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
LYSMD4-202ENST00000344791 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
LYSMD4-202ENST00000344791 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
LYSMD4-202ENST00000344791 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
LYSMD4-202ENST00000344791 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
LYSMD4-202ENST00000344791 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
LYSMD4-202ENST00000344791 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
LYSMD4-202ENST00000344791 MUC5BQ9HC84 5762 aaPredicted RBP3.5□□□□□ -1.85
LYSMD4-202ENST00000344791 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
LYSMD4-202ENST00000344791 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
LYSMD4-202ENST00000344791 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.87
LYSMD4-202ENST00000344791 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
LYSMD4-202ENST00000344791 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
LYSMD4-202ENST00000344791 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
LYSMD4-202ENST00000344791 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
LYSMD4-202ENST00000344791 LCE1FQ5T754 118 aa3□□□□□ -1.93
LYSMD4-202ENST00000344791 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
LYSMD4-202ENST00000344791 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 83.9 ms