RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 LCE3BQ5TA77 95 aa3.9□□□□□ -1.78
TRAK1-202ENST00000341421 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
TRAK1-202ENST00000341421 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
TRAK1-202ENST00000341421 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
TRAK1-202ENST00000341421 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.8
TRAK1-202ENST00000341421 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
TRAK1-202ENST00000341421 MT1MQ8N339 61 aa3.74□□□□□ -1.81
TRAK1-202ENST00000341421 SPRR2EP22531 72 aa3.7□□□□□ -1.82
TRAK1-202ENST00000341421 SPRR2BP35325 72 aa3.7□□□□□ -1.82
TRAK1-202ENST00000341421 SPRR2AP35326 72 aa3.7□□□□□ -1.82
TRAK1-202ENST00000341421 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
TRAK1-202ENST00000341421 USH2AO75445 5202 aa3.64□□□□□ -1.83
TRAK1-202ENST00000341421 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
TRAK1-202ENST00000341421 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
TRAK1-202ENST00000341421 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
TRAK1-202ENST00000341421 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
TRAK1-202ENST00000341421 SPRR2DP22532 72 aa3.55□□□□□ -1.84
TRAK1-202ENST00000341421 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
TRAK1-202ENST00000341421 KMT2DO14686 5537 aa3.48□□□□□ -1.85
TRAK1-202ENST00000341421 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
TRAK1-202ENST00000341421 PRM1P04553 51 aa3.46□□□□□ -1.86
TRAK1-202ENST00000341421 MT1AP04731 61 aa3.46□□□□□ -1.86
TRAK1-202ENST00000341421 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
TRAK1-202ENST00000341421 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.86
TRAK1-202ENST00000341421 KRTAP9-2Q9BYQ4 174 aa3.38□□□□□ -1.87
TRAK1-202ENST00000341421 MT3P25713 68 aa3.35□□□□□ -1.87
TRAK1-202ENST00000341421 SSPOA2VEC9 5147 aa3.34□□□□□ -1.88
TRAK1-202ENST00000341421 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
TRAK1-202ENST00000341421 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
TRAK1-202ENST00000341421 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
TRAK1-202ENST00000341421 MT4P47944 62 aa3.24□□□□□ -1.89
TRAK1-202ENST00000341421 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
TRAK1-202ENST00000341421 KRTAP9-4Q9BYQ2 154 aa3.19□□□□□ -1.9
TRAK1-202ENST00000341421 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
TRAK1-202ENST00000341421 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
TRAK1-202ENST00000341421 LCE1DQ5T752 114 aa3.15□□□□□ -1.9
TRAK1-202ENST00000341421 KRTAP9-6A0A140TA67 174 aa3.15□□□□□ -1.91
TRAK1-202ENST00000341421 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
TRAK1-202ENST00000341421 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
TRAK1-202ENST00000341421 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
TRAK1-202ENST00000341421 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
TRAK1-202ENST00000341421 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
TRAK1-202ENST00000341421 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
TRAK1-202ENST00000341421 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
TRAK1-202ENST00000341421 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
TRAK1-202ENST00000341421 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
TRAK1-202ENST00000341421 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
TRAK1-202ENST00000341421 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
TRAK1-202ENST00000341421 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
TRAK1-202ENST00000341421 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
TRAK1-202ENST00000341421 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
TRAK1-202ENST00000341421 NEBP20929 6669 aa2.68□□□□□ -1.98
TRAK1-202ENST00000341421 KRTAP4-6Q9BYQ5 205 aa2.68□□□□□ -1.98
TRAK1-202ENST00000341421 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
TRAK1-202ENST00000341421 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
TRAK1-202ENST00000341421 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
TRAK1-202ENST00000341421 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.02
TRAK1-202ENST00000341421 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
TRAK1-202ENST00000341421 KRTAP9-9Q9BYP9 154 aa2.34□□□□□ -2.03
TRAK1-202ENST00000341421 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
TRAK1-202ENST00000341421 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
TRAK1-202ENST00000341421 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
TRAK1-202ENST00000341421 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
TRAK1-202ENST00000341421 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
TRAK1-202ENST00000341421 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
TRAK1-202ENST00000341421 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
TRAK1-202ENST00000341421 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
TRAK1-202ENST00000341421 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
TRAK1-202ENST00000341421 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
TRAK1-202ENST00000341421 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
TRAK1-202ENST00000341421 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
TRAK1-202ENST00000341421 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
TRAK1-202ENST00000341421 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.12
TRAK1-202ENST00000341421 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
TRAK1-202ENST00000341421 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
TRAK1-202ENST00000341421 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
TRAK1-202ENST00000341421 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 110.9 ms