RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
DNMT1-201ENST00000340748 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.32□□□□□ -1.72
DNMT1-201ENST00000340748 MT4P47944 62 aa4.32□□□□□ -1.72
DNMT1-201ENST00000340748 HMCN2Q8NDA2 5059 aa4.3□□□□□ -1.72
DNMT1-201ENST00000340748 FLGP20930 4061 aaPredicted RBP4.28□□□□□ -1.72
DNMT1-201ENST00000340748 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
DNMT1-201ENST00000340748 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
DNMT1-201ENST00000340748 MT1LQ93083 61 aa4.21□□□□□ -1.74
DNMT1-201ENST00000340748 MT1EP04732 61 aa4.19□□□□□ -1.74
DNMT1-201ENST00000340748 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
DNMT1-201ENST00000340748 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
DNMT1-201ENST00000340748 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
DNMT1-201ENST00000340748 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
DNMT1-201ENST00000340748 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
DNMT1-201ENST00000340748 MT1MQ8N339 61 aa4.09□□□□□ -1.75
DNMT1-201ENST00000340748 MUC2Q02817 5179 aa4.02□□□□□ -1.77
DNMT1-201ENST00000340748 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
DNMT1-201ENST00000340748 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
DNMT1-201ENST00000340748 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
DNMT1-201ENST00000340748 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
DNMT1-201ENST00000340748 MT3P25713 68 aa3.92□□□□□ -1.78
DNMT1-201ENST00000340748 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
DNMT1-201ENST00000340748 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
DNMT1-201ENST00000340748 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
DNMT1-201ENST00000340748 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
DNMT1-201ENST00000340748 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
DNMT1-201ENST00000340748 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
DNMT1-201ENST00000340748 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
DNMT1-201ENST00000340748 MT1AP04731 61 aa3.78□□□□□ -1.8
DNMT1-201ENST00000340748 PRM1P04553 51 aa3.76□□□□□ -1.81
DNMT1-201ENST00000340748 NEBP20929 6669 aa3.7□□□□□ -1.82
DNMT1-201ENST00000340748 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
DNMT1-201ENST00000340748 USH2AO75445 5202 aa3.66□□□□□ -1.82
DNMT1-201ENST00000340748 MACF1Q9UPN3 7388 aaKnown RBP3.61□□□□□ -1.83
DNMT1-201ENST00000340748 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
DNMT1-201ENST00000340748 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
DNMT1-201ENST00000340748 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
DNMT1-201ENST00000340748 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
DNMT1-201ENST00000340748 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
DNMT1-201ENST00000340748 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
DNMT1-201ENST00000340748 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
DNMT1-201ENST00000340748 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
DNMT1-201ENST00000340748 KMT2DO14686 5537 aa3.41□□□□□ -1.86
DNMT1-201ENST00000340748 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
DNMT1-201ENST00000340748 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
DNMT1-201ENST00000340748 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
DNMT1-201ENST00000340748 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
DNMT1-201ENST00000340748 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
DNMT1-201ENST00000340748 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
DNMT1-201ENST00000340748 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
DNMT1-201ENST00000340748 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
DNMT1-201ENST00000340748 MDN1Q9NU22 5596 aa3.17□□□□□ -1.9
DNMT1-201ENST00000340748 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
DNMT1-201ENST00000340748 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
DNMT1-201ENST00000340748 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
DNMT1-201ENST00000340748 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
DNMT1-201ENST00000340748 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
DNMT1-201ENST00000340748 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
DNMT1-201ENST00000340748 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
DNMT1-201ENST00000340748 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
DNMT1-201ENST00000340748 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
DNMT1-201ENST00000340748 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
DNMT1-201ENST00000340748 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
DNMT1-201ENST00000340748 KRTAP5-8O75690 187 aa2.57□□□□□ -2
DNMT1-201ENST00000340748 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
DNMT1-201ENST00000340748 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
DNMT1-201ENST00000340748 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
DNMT1-201ENST00000340748 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
DNMT1-201ENST00000340748 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
DNMT1-201ENST00000340748 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
DNMT1-201ENST00000340748 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
DNMT1-201ENST00000340748 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
DNMT1-201ENST00000340748 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
DNMT1-201ENST00000340748 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
DNMT1-201ENST00000340748 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
DNMT1-201ENST00000340748 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
DNMT1-201ENST00000340748 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms