RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 KMT2DO14686 5537 aa4.97□□□□□ -1.61
RET-201ENST00000340058 MT1LQ93083 61 aa4.94□□□□□ -1.62
RET-201ENST00000340058 MT1EP04732 61 aa4.93□□□□□ -1.62
RET-201ENST00000340058 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
RET-201ENST00000340058 SYNE2Q8WXH0 6885 aaKnown RBP4.87□□□□□ -1.63
RET-201ENST00000340058 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
RET-201ENST00000340058 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
RET-201ENST00000340058 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
RET-201ENST00000340058 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
RET-201ENST00000340058 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
RET-201ENST00000340058 SPRR2DP22532 72 aa4.79□□□□□ -1.64
RET-201ENST00000340058 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
RET-201ENST00000340058 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
RET-201ENST00000340058 MT1MQ8N339 61 aa4.72□□□□□ -1.65
RET-201ENST00000340058 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
RET-201ENST00000340058 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
RET-201ENST00000340058 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
RET-201ENST00000340058 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
RET-201ENST00000340058 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
RET-201ENST00000340058 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
RET-201ENST00000340058 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
RET-201ENST00000340058 LCE3EQ5T5B0 92 aa4.44□□□□□ -1.7
RET-201ENST00000340058 MT4P47944 62 aa4.44□□□□□ -1.7
RET-201ENST00000340058 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
RET-201ENST00000340058 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
RET-201ENST00000340058 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
RET-201ENST00000340058 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
RET-201ENST00000340058 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
RET-201ENST00000340058 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
RET-201ENST00000340058 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
RET-201ENST00000340058 MT3P25713 68 aa4.24□□□□□ -1.73
RET-201ENST00000340058 MT1AP04731 61 aa4.23□□□□□ -1.73
RET-201ENST00000340058 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
RET-201ENST00000340058 PRM1P04553 51 aa4.18□□□□□ -1.74
RET-201ENST00000340058 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
RET-201ENST00000340058 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
RET-201ENST00000340058 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
RET-201ENST00000340058 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
RET-201ENST00000340058 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
RET-201ENST00000340058 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
RET-201ENST00000340058 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
RET-201ENST00000340058 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.78
RET-201ENST00000340058 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
RET-201ENST00000340058 NEBP20929 6669 aa3.84□□□□□ -1.79
RET-201ENST00000340058 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
RET-201ENST00000340058 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
RET-201ENST00000340058 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
RET-201ENST00000340058 LCE4AQ5TA78 99 aa3.65□□□□□ -1.83
RET-201ENST00000340058 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
RET-201ENST00000340058 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
RET-201ENST00000340058 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
RET-201ENST00000340058 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
RET-201ENST00000340058 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
RET-201ENST00000340058 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
RET-201ENST00000340058 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
RET-201ENST00000340058 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
RET-201ENST00000340058 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
RET-201ENST00000340058 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
RET-201ENST00000340058 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
RET-201ENST00000340058 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
RET-201ENST00000340058 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
RET-201ENST00000340058 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
RET-201ENST00000340058 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
RET-201ENST00000340058 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
RET-201ENST00000340058 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
RET-201ENST00000340058 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
RET-201ENST00000340058 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
RET-201ENST00000340058 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
RET-201ENST00000340058 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
RET-201ENST00000340058 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
RET-201ENST00000340058 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
RET-201ENST00000340058 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
RET-201ENST00000340058 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
RET-201ENST00000340058 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
RET-201ENST00000340058 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
RET-201ENST00000340058 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
RET-201ENST00000340058 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 46.5 ms