RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 MT1GP13640 62 aa3.91□□□□□ -1.78
ZNF648-201ENST00000339948 MT1LQ93083 61 aa3.89□□□□□ -1.79
ZNF648-201ENST00000339948 LCE2AQ5TA79 106 aaPredicted RBP3.87□□□□□ -1.79
ZNF648-201ENST00000339948 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
ZNF648-201ENST00000339948 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
ZNF648-201ENST00000339948 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
ZNF648-201ENST00000339948 MT1EP04732 61 aa3.84□□□□□ -1.79
ZNF648-201ENST00000339948 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
ZNF648-201ENST00000339948 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
ZNF648-201ENST00000339948 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
ZNF648-201ENST00000339948 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
ZNF648-201ENST00000339948 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
ZNF648-201ENST00000339948 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.82
ZNF648-201ENST00000339948 MT1MQ8N339 61 aa3.61□□□□□ -1.83
ZNF648-201ENST00000339948 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
ZNF648-201ENST00000339948 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
ZNF648-201ENST00000339948 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
ZNF648-201ENST00000339948 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
ZNF648-201ENST00000339948 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
ZNF648-201ENST00000339948 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
ZNF648-201ENST00000339948 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
ZNF648-201ENST00000339948 PRM1P04553 51 aa3.42□□□□□ -1.86
ZNF648-201ENST00000339948 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.87
ZNF648-201ENST00000339948 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
ZNF648-201ENST00000339948 KRTAP9-2Q9BYQ4 174 aa3.36□□□□□ -1.87
ZNF648-201ENST00000339948 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
ZNF648-201ENST00000339948 SPRR2EP22531 72 aa3.2□□□□□ -1.9
ZNF648-201ENST00000339948 SPRR2BP35325 72 aa3.2□□□□□ -1.9
ZNF648-201ENST00000339948 SPRR2AP35326 72 aa3.2□□□□□ -1.9
ZNF648-201ENST00000339948 MT1AP04731 61 aa3.19□□□□□ -1.9
ZNF648-201ENST00000339948 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
ZNF648-201ENST00000339948 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
ZNF648-201ENST00000339948 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
ZNF648-201ENST00000339948 KRTAP9-6A0A140TA67 174 aa3.15□□□□□ -1.9
ZNF648-201ENST00000339948 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
ZNF648-201ENST00000339948 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
ZNF648-201ENST00000339948 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
ZNF648-201ENST00000339948 SPRR2DP22532 72 aa3.03□□□□□ -1.92
ZNF648-201ENST00000339948 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
ZNF648-201ENST00000339948 MT3P25713 68 aa2.95□□□□□ -1.94
ZNF648-201ENST00000339948 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
ZNF648-201ENST00000339948 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
ZNF648-201ENST00000339948 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
ZNF648-201ENST00000339948 MT4P47944 62 aa2.88□□□□□ -1.95
ZNF648-201ENST00000339948 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.79□□□□□ -1.96
ZNF648-201ENST00000339948 KRTAP4-6Q9BYQ5 205 aa2.74□□□□□ -1.97
ZNF648-201ENST00000339948 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
ZNF648-201ENST00000339948 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.99
ZNF648-201ENST00000339948 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
ZNF648-201ENST00000339948 NEBP20929 6669 aa2.61□□□□□ -1.99
ZNF648-201ENST00000339948 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
ZNF648-201ENST00000339948 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
ZNF648-201ENST00000339948 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
ZNF648-201ENST00000339948 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
ZNF648-201ENST00000339948 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
ZNF648-201ENST00000339948 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
ZNF648-201ENST00000339948 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
ZNF648-201ENST00000339948 LCE4AQ5TA78 99 aa2.36□□□□□ -2.03
ZNF648-201ENST00000339948 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
ZNF648-201ENST00000339948 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
ZNF648-201ENST00000339948 KRTAP5-3Q6L8H2 238 aa2.31□□□□□ -2.04
ZNF648-201ENST00000339948 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
ZNF648-201ENST00000339948 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
ZNF648-201ENST00000339948 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
ZNF648-201ENST00000339948 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
ZNF648-201ENST00000339948 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.07
ZNF648-201ENST00000339948 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
ZNF648-201ENST00000339948 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
ZNF648-201ENST00000339948 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
ZNF648-201ENST00000339948 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
ZNF648-201ENST00000339948 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
ZNF648-201ENST00000339948 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
ZNF648-201ENST00000339948 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
ZNF648-201ENST00000339948 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
ZNF648-201ENST00000339948 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
ZNF648-201ENST00000339948 PHGR1C9JFL3 82 aa1.53□□□□□ -2.17
ZNF648-201ENST00000339948 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 48 ms