RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
SCARB1-202ENST00000339570 MT1LQ93083 61 aa5.47□□□□□ -1.53
SCARB1-202ENST00000339570 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
SCARB1-202ENST00000339570 MT1EP04732 61 aa5.43□□□□□ -1.54
SCARB1-202ENST00000339570 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
SCARB1-202ENST00000339570 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
SCARB1-202ENST00000339570 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
SCARB1-202ENST00000339570 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
SCARB1-202ENST00000339570 MT1GP13640 62 aa5.38□□□□□ -1.55
SCARB1-202ENST00000339570 KRTAP9-6A0A140TA67 174 aa5.36□□□□□ -1.55
SCARB1-202ENST00000339570 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
SCARB1-202ENST00000339570 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
SCARB1-202ENST00000339570 OBSCNQ5VST9 7968 aa5.35□□□□□ -1.55
SCARB1-202ENST00000339570 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
SCARB1-202ENST00000339570 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.58
SCARB1-202ENST00000339570 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
SCARB1-202ENST00000339570 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
SCARB1-202ENST00000339570 LCE3BQ5TA77 95 aa5.1□□□□□ -1.59
SCARB1-202ENST00000339570 MT1MQ8N339 61 aa5.08□□□□□ -1.6
SCARB1-202ENST00000339570 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
SCARB1-202ENST00000339570 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
SCARB1-202ENST00000339570 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
SCARB1-202ENST00000339570 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
SCARB1-202ENST00000339570 MDN1Q9NU22 5596 aa4.99□□□□□ -1.61
SCARB1-202ENST00000339570 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
SCARB1-202ENST00000339570 KRTAP9-2Q9BYQ4 174 aa4.92□□□□□ -1.62
SCARB1-202ENST00000339570 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
SCARB1-202ENST00000339570 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
SCARB1-202ENST00000339570 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
SCARB1-202ENST00000339570 KRTAP4-12Q9BQ66 201 aa4.61□□□□□ -1.67
SCARB1-202ENST00000339570 PRM1P04553 51 aa4.6□□□□□ -1.67
SCARB1-202ENST00000339570 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
SCARB1-202ENST00000339570 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
SCARB1-202ENST00000339570 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
SCARB1-202ENST00000339570 MT1AP04731 61 aa4.49□□□□□ -1.69
SCARB1-202ENST00000339570 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
SCARB1-202ENST00000339570 SPRR2EP22531 72 aa4.46□□□□□ -1.7
SCARB1-202ENST00000339570 SPRR2BP35325 72 aa4.46□□□□□ -1.7
SCARB1-202ENST00000339570 SPRR2AP35326 72 aa4.46□□□□□ -1.7
SCARB1-202ENST00000339570 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
SCARB1-202ENST00000339570 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
SCARB1-202ENST00000339570 SPRR2DP22532 72 aa4.22□□□□□ -1.73
SCARB1-202ENST00000339570 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
SCARB1-202ENST00000339570 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
SCARB1-202ENST00000339570 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
SCARB1-202ENST00000339570 MT3P25713 68 aa4.08□□□□□ -1.76
SCARB1-202ENST00000339570 LCE1EQ5T753 118 aa4□□□□□ -1.77
SCARB1-202ENST00000339570 MT4P47944 62 aa3.95□□□□□ -1.78
SCARB1-202ENST00000339570 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
SCARB1-202ENST00000339570 NEBP20929 6669 aa3.93□□□□□ -1.78
SCARB1-202ENST00000339570 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
SCARB1-202ENST00000339570 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
SCARB1-202ENST00000339570 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
SCARB1-202ENST00000339570 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
SCARB1-202ENST00000339570 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
SCARB1-202ENST00000339570 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
SCARB1-202ENST00000339570 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
SCARB1-202ENST00000339570 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
SCARB1-202ENST00000339570 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
SCARB1-202ENST00000339570 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
SCARB1-202ENST00000339570 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
SCARB1-202ENST00000339570 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
SCARB1-202ENST00000339570 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
SCARB1-202ENST00000339570 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
SCARB1-202ENST00000339570 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
SCARB1-202ENST00000339570 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
SCARB1-202ENST00000339570 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
SCARB1-202ENST00000339570 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
SCARB1-202ENST00000339570 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SCARB1-202ENST00000339570 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
SCARB1-202ENST00000339570 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
SCARB1-202ENST00000339570 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
SCARB1-202ENST00000339570 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
SCARB1-202ENST00000339570 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
SCARB1-202ENST00000339570 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
SCARB1-202ENST00000339570 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
SCARB1-202ENST00000339570 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms