RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.52
TRIM9-202ENST00000338969 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
TRIM9-202ENST00000338969 KRTAP19-6Q3LI70 58 aa5.53□□□□□ -1.52
TRIM9-202ENST00000338969 LCE2DQ5TA82 110 aaPredicted RBP5.52□□□□□ -1.53
TRIM9-202ENST00000338969 MT1GP13640 62 aa5.5□□□□□ -1.53
TRIM9-202ENST00000338969 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
TRIM9-202ENST00000338969 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
TRIM9-202ENST00000338969 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
TRIM9-202ENST00000338969 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
TRIM9-202ENST00000338969 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
TRIM9-202ENST00000338969 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
TRIM9-202ENST00000338969 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
TRIM9-202ENST00000338969 MT1MQ8N339 61 aa5.3□□□□□ -1.56
TRIM9-202ENST00000338969 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
TRIM9-202ENST00000338969 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
TRIM9-202ENST00000338969 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
TRIM9-202ENST00000338969 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
TRIM9-202ENST00000338969 KRTAP4-9Q9BYQ8 210 aa5.12□□□□□ -1.59
TRIM9-202ENST00000338969 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
TRIM9-202ENST00000338969 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
TRIM9-202ENST00000338969 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
TRIM9-202ENST00000338969 SPRR2EP22531 72 aa4.92□□□□□ -1.62
TRIM9-202ENST00000338969 SPRR2BP35325 72 aa4.92□□□□□ -1.62
TRIM9-202ENST00000338969 SPRR2AP35326 72 aa4.92□□□□□ -1.62
TRIM9-202ENST00000338969 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
TRIM9-202ENST00000338969 LCE1AQ5T7P2 110 aa4.85□□□□□ -1.63
TRIM9-202ENST00000338969 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
TRIM9-202ENST00000338969 MT1AP04731 61 aa4.69□□□□□ -1.66
TRIM9-202ENST00000338969 SPRR2DP22532 72 aa4.69□□□□□ -1.66
TRIM9-202ENST00000338969 KRTAP5-9P26371 169 aa4.64□□□□□ -1.67
TRIM9-202ENST00000338969 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
TRIM9-202ENST00000338969 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
TRIM9-202ENST00000338969 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
TRIM9-202ENST00000338969 PRM1P04553 51 aa4.54□□□□□ -1.68
TRIM9-202ENST00000338969 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
TRIM9-202ENST00000338969 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
TRIM9-202ENST00000338969 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.7
TRIM9-202ENST00000338969 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.7
TRIM9-202ENST00000338969 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
TRIM9-202ENST00000338969 MT4P47944 62 aa4.33□□□□□ -1.72
TRIM9-202ENST00000338969 MT3P25713 68 aa4.26□□□□□ -1.73
TRIM9-202ENST00000338969 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
TRIM9-202ENST00000338969 NEBP20929 6669 aa4.2□□□□□ -1.74
TRIM9-202ENST00000338969 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
TRIM9-202ENST00000338969 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
TRIM9-202ENST00000338969 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
TRIM9-202ENST00000338969 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
TRIM9-202ENST00000338969 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
TRIM9-202ENST00000338969 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
TRIM9-202ENST00000338969 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
TRIM9-202ENST00000338969 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
TRIM9-202ENST00000338969 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
TRIM9-202ENST00000338969 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
TRIM9-202ENST00000338969 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
TRIM9-202ENST00000338969 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.83
TRIM9-202ENST00000338969 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
TRIM9-202ENST00000338969 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
TRIM9-202ENST00000338969 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
TRIM9-202ENST00000338969 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
TRIM9-202ENST00000338969 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
TRIM9-202ENST00000338969 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
TRIM9-202ENST00000338969 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
TRIM9-202ENST00000338969 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
TRIM9-202ENST00000338969 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
TRIM9-202ENST00000338969 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
TRIM9-202ENST00000338969 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
TRIM9-202ENST00000338969 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
TRIM9-202ENST00000338969 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
TRIM9-202ENST00000338969 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
TRIM9-202ENST00000338969 LCE1FQ5T754 118 aa2.84□□□□□ -1.96
TRIM9-202ENST00000338969 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
TRIM9-202ENST00000338969 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
TRIM9-202ENST00000338969 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
TRIM9-202ENST00000338969 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
TRIM9-202ENST00000338969 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
TRIM9-202ENST00000338969 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
TRIM9-202ENST00000338969 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 57.6 ms