RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
HMG20A-201ENST00000336216 MT1GP13640 62 aa2.26□□□□□ -2.05
HMG20A-201ENST00000336216 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
HMG20A-201ENST00000336216 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
HMG20A-201ENST00000336216 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
HMG20A-201ENST00000336216 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
HMG20A-201ENST00000336216 LCE3BQ5TA77 95 aa2.19□□□□□ -2.06
HMG20A-201ENST00000336216 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.18□□□□□ -2.06
HMG20A-201ENST00000336216 SPRR2EP22531 72 aa2.16□□□□□ -2.06
HMG20A-201ENST00000336216 SPRR2BP35325 72 aa2.16□□□□□ -2.06
HMG20A-201ENST00000336216 SPRR2AP35326 72 aa2.16□□□□□ -2.06
HMG20A-201ENST00000336216 KRTAP19-4Q3LI73 84 aa2.16□□□□□ -2.06
HMG20A-201ENST00000336216 MT1LQ93083 61 aa2.16□□□□□ -2.06
HMG20A-201ENST00000336216 MACF1Q9UPN3 7388 aaKnown RBP2.15□□□□□ -2.06
HMG20A-201ENST00000336216 MT1EP04732 61 aa2.15□□□□□ -2.07
HMG20A-201ENST00000336216 KRTAP9-2Q9BYQ4 174 aa2.15□□□□□ -2.07
HMG20A-201ENST00000336216 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
HMG20A-201ENST00000336216 KRTAP19-7Q3SYF9 63 aa2.13□□□□□ -2.07
HMG20A-201ENST00000336216 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
HMG20A-201ENST00000336216 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
HMG20A-201ENST00000336216 KRTAP9-6A0A140TA67 174 aa2.1□□□□□ -2.07
HMG20A-201ENST00000336216 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
HMG20A-201ENST00000336216 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
HMG20A-201ENST00000336216 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
HMG20A-201ENST00000336216 KRTAP9-9Q9BYP9 154 aa2.07□□□□□ -2.08
HMG20A-201ENST00000336216 KRTAP9-4Q9BYQ2 154 aa2.07□□□□□ -2.08
HMG20A-201ENST00000336216 SPRR2DP22532 72 aa2.06□□□□□ -2.08
HMG20A-201ENST00000336216 MT1MQ8N339 61 aa2.06□□□□□ -2.08
HMG20A-201ENST00000336216 KRTAP4-9Q9BYQ8 210 aa2.02□□□□□ -2.09
HMG20A-201ENST00000336216 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
HMG20A-201ENST00000336216 MDN1Q9NU22 5596 aa1.98□□□□□ -2.09
HMG20A-201ENST00000336216 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
HMG20A-201ENST00000336216 MT4P47944 62 aa1.94□□□□□ -2.1
HMG20A-201ENST00000336216 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
HMG20A-201ENST00000336216 LCE5AQ5TCM9 118 aa1.92□□□□□ -2.1
HMG20A-201ENST00000336216 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
HMG20A-201ENST00000336216 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
HMG20A-201ENST00000336216 PRM1P04553 51 aa1.91□□□□□ -2.1
HMG20A-201ENST00000336216 LCE1AQ5T7P2 110 aa1.89□□□□□ -2.11
HMG20A-201ENST00000336216 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
HMG20A-201ENST00000336216 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
HMG20A-201ENST00000336216 KRTAP9-7A8MTY7 169 aa1.87□□□□□ -2.11
HMG20A-201ENST00000336216 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
HMG20A-201ENST00000336216 LCE1DQ5T752 114 aa1.82□□□□□ -2.12
HMG20A-201ENST00000336216 MT1AP04731 61 aa1.82□□□□□ -2.12
HMG20A-201ENST00000336216 MT3P25713 68 aa1.82□□□□□ -2.12
HMG20A-201ENST00000336216 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
HMG20A-201ENST00000336216 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
HMG20A-201ENST00000336216 KRTAP4-11Q9BYQ6 195 aa1.78□□□□□ -2.12
HMG20A-201ENST00000336216 LCE4AQ5TA78 99 aa1.73□□□□□ -2.13
HMG20A-201ENST00000336216 NEBP20929 6669 aa1.73□□□□□ -2.13
HMG20A-201ENST00000336216 KRTAP5-5Q701N2 237 aaPredicted RBP1.7□□□□□ -2.14
HMG20A-201ENST00000336216 KRTAP20-1Q3LI63 56 aa1.67□□□□□ -2.14
HMG20A-201ENST00000336216 KRTAP2-2Q9BYT5 123 aa1.67□□□□□ -2.14
HMG20A-201ENST00000336216 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
HMG20A-201ENST00000336216 KRTAP5-4Q6L8H1 288 aa1.59□□□□□ -2.15
HMG20A-201ENST00000336216 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
HMG20A-201ENST00000336216 HMCN1Q96RW7 5635 aa1.54□□□□□ -2.16
HMG20A-201ENST00000336216 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
HMG20A-201ENST00000336216 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.17
HMG20A-201ENST00000336216 LCE1EQ5T753 118 aa1.5□□□□□ -2.17
HMG20A-201ENST00000336216 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
HMG20A-201ENST00000336216 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
HMG20A-201ENST00000336216 LCE1FQ5T754 118 aa1.41□□□□□ -2.18
HMG20A-201ENST00000336216 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
HMG20A-201ENST00000336216 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.19
HMG20A-201ENST00000336216 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
HMG20A-201ENST00000336216 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.19
HMG20A-201ENST00000336216 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
HMG20A-201ENST00000336216 KRTAP5-11Q6L8G4 156 aa1.28□□□□□ -2.2
HMG20A-201ENST00000336216 KRTAP5-1Q6L8H4 278 aa1.28□□□□□ -2.2
HMG20A-201ENST00000336216 KRTAP5-8O75690 187 aa1.23□□□□□ -2.21
HMG20A-201ENST00000336216 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
HMG20A-201ENST00000336216 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
HMG20A-201ENST00000336216 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
HMG20A-201ENST00000336216 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
HMG20A-201ENST00000336216 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 87.9 ms