RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 LOC100996750A0A140TA64 210 aa6.35□□□□□ -1.39
RFTN1-201ENST00000334133 INE1O15225 51 aa6.31□□□□□ -1.4
RFTN1-201ENST00000334133 MACF1Q9UPN3 7388 aaKnown RBP6.27□□□□□ -1.41
RFTN1-201ENST00000334133 MT1GP13640 62 aa6.26□□□□□ -1.41
RFTN1-201ENST00000334133 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
RFTN1-201ENST00000334133 KRTAP2-3P0C7H8 128 aa6.24□□□□□ -1.41
RFTN1-201ENST00000334133 KRTAP2-4Q9BYR9 128 aa6.24□□□□□ -1.41
RFTN1-201ENST00000334133 KRTAP2-1Q9BYU5 128 aa6.24□□□□□ -1.41
RFTN1-201ENST00000334133 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
RFTN1-201ENST00000334133 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
RFTN1-201ENST00000334133 MT1MQ8N339 61 aa6.2□□□□□ -1.42
RFTN1-201ENST00000334133 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
RFTN1-201ENST00000334133 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.43
RFTN1-201ENST00000334133 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
RFTN1-201ENST00000334133 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
RFTN1-201ENST00000334133 KRTAP9-2Q9BYQ4 174 aa5.92□□□□□ -1.46
RFTN1-201ENST00000334133 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
RFTN1-201ENST00000334133 LCE3BQ5TA77 95 aa5.76□□□□□ -1.49
RFTN1-201ENST00000334133 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
RFTN1-201ENST00000334133 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
RFTN1-201ENST00000334133 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.5
RFTN1-201ENST00000334133 SPRR2EP22531 72 aa5.64□□□□□ -1.51
RFTN1-201ENST00000334133 SPRR2BP35325 72 aa5.64□□□□□ -1.51
RFTN1-201ENST00000334133 SPRR2AP35326 72 aa5.64□□□□□ -1.51
RFTN1-201ENST00000334133 KRTAP5-9P26371 169 aa5.62□□□□□ -1.51
RFTN1-201ENST00000334133 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
RFTN1-201ENST00000334133 MT1AP04731 61 aa5.49□□□□□ -1.53
RFTN1-201ENST00000334133 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
RFTN1-201ENST00000334133 KRTAP5-5Q701N2 237 aaPredicted RBP5.43□□□□□ -1.54
RFTN1-201ENST00000334133 SPRR2DP22532 72 aa5.38□□□□□ -1.55
RFTN1-201ENST00000334133 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
RFTN1-201ENST00000334133 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
RFTN1-201ENST00000334133 KRTAP6-3Q3LI67 103 aa5.21□□□□□ -1.58
RFTN1-201ENST00000334133 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
RFTN1-201ENST00000334133 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
RFTN1-201ENST00000334133 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
RFTN1-201ENST00000334133 KRTAP9-6A0A140TA67 174 aa5.11□□□□□ -1.59
RFTN1-201ENST00000334133 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
RFTN1-201ENST00000334133 NEBP20929 6669 aa4.96□□□□□ -1.62
RFTN1-201ENST00000334133 PRM1P04553 51 aa4.95□□□□□ -1.62
RFTN1-201ENST00000334133 MT3P25713 68 aa4.95□□□□□ -1.62
RFTN1-201ENST00000334133 MT4P47944 62 aa4.86□□□□□ -1.63
RFTN1-201ENST00000334133 KRTAP4-6Q9BYQ5 205 aa4.85□□□□□ -1.63
RFTN1-201ENST00000334133 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
RFTN1-201ENST00000334133 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
RFTN1-201ENST00000334133 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
RFTN1-201ENST00000334133 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
RFTN1-201ENST00000334133 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
RFTN1-201ENST00000334133 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
RFTN1-201ENST00000334133 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
RFTN1-201ENST00000334133 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
RFTN1-201ENST00000334133 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
RFTN1-201ENST00000334133 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
RFTN1-201ENST00000334133 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
RFTN1-201ENST00000334133 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
RFTN1-201ENST00000334133 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
RFTN1-201ENST00000334133 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
RFTN1-201ENST00000334133 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
RFTN1-201ENST00000334133 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
RFTN1-201ENST00000334133 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
RFTN1-201ENST00000334133 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
RFTN1-201ENST00000334133 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
RFTN1-201ENST00000334133 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
RFTN1-201ENST00000334133 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
RFTN1-201ENST00000334133 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
RFTN1-201ENST00000334133 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
RFTN1-201ENST00000334133 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
RFTN1-201ENST00000334133 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
RFTN1-201ENST00000334133 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
RFTN1-201ENST00000334133 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
RFTN1-201ENST00000334133 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
RFTN1-201ENST00000334133 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
RFTN1-201ENST00000334133 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
RFTN1-201ENST00000334133 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
RFTN1-201ENST00000334133 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
RFTN1-201ENST00000334133 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
RFTN1-201ENST00000334133 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 127.7 ms