RNA–Protein interactions for RNA: ENST00000334121.10

SREK1-202, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SREK1, Length 6,781 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-202ENST00000334121 MT3P25713 68 aa3.4□□□□□ -1.86
SREK1-202ENST00000334121 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.87
SREK1-202ENST00000334121 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
SREK1-202ENST00000334121 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
SREK1-202ENST00000334121 RYR2Q92736 4967 aa3.36□□□□□ -1.87
SREK1-202ENST00000334121 PCLOQ9Y6V0 5065 aa3.32□□□□□ -1.88
SREK1-202ENST00000334121 KRTAP19-2Q3LHN2 52 aa3.3□□□□□ -1.88
SREK1-202ENST00000334121 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
SREK1-202ENST00000334121 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
SREK1-202ENST00000334121 BIRC6Q9NR09 4857 aa3.24□□□□□ -1.89
SREK1-202ENST00000334121 KRTAP9-7A8MTY7 169 aa3.24□□□□□ -1.89
SREK1-202ENST00000334121 HERC1Q15751 4861 aa3.23□□□□□ -1.89
SREK1-202ENST00000334121 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
SREK1-202ENST00000334121 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
SREK1-202ENST00000334121 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
SREK1-202ENST00000334121 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
SREK1-202ENST00000334121 EPPK1P58107 5090 aaKnown RBP3.13□□□□□ -1.91
SREK1-202ENST00000334121 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
SREK1-202ENST00000334121 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
SREK1-202ENST00000334121 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
SREK1-202ENST00000334121 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
SREK1-202ENST00000334121 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
SREK1-202ENST00000334121 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
SREK1-202ENST00000334121 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
SREK1-202ENST00000334121 MUC2Q02817 5179 aa3.09□□□□□ -1.91
SREK1-202ENST00000334121 MT1AP04731 61 aa3.09□□□□□ -1.92
SREK1-202ENST00000334121 LCE2AQ5TA79 106 aaPredicted RBP3.07□□□□□ -1.92
SREK1-202ENST00000334121 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
SREK1-202ENST00000334121 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.93
SREK1-202ENST00000334121 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
SREK1-202ENST00000334121 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
SREK1-202ENST00000334121 ABCA13Q86UQ4 5058 aa2.96□□□□□ -1.94
SREK1-202ENST00000334121 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
SREK1-202ENST00000334121 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
SREK1-202ENST00000334121 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
SREK1-202ENST00000334121 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
SREK1-202ENST00000334121 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.94
SREK1-202ENST00000334121 LCE4AQ5TA78 99 aa2.86□□□□□ -1.95
SREK1-202ENST00000334121 RNF213Q63HN8 5207 aa2.83□□□□□ -1.96
SREK1-202ENST00000334121 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
SREK1-202ENST00000334121 KMT2DO14686 5537 aa2.78□□□□□ -1.96
SREK1-202ENST00000334121 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
SREK1-202ENST00000334121 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
SREK1-202ENST00000334121 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
SREK1-202ENST00000334121 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
SREK1-202ENST00000334121 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.98
SREK1-202ENST00000334121 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
SREK1-202ENST00000334121 MACF1Q9UPN3 7388 aaKnown RBP2.63□□□□□ -1.99
SREK1-202ENST00000334121 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
SREK1-202ENST00000334121 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
SREK1-202ENST00000334121 USH2AO75445 5202 aa2.55□□□□□ -2
SREK1-202ENST00000334121 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
SREK1-202ENST00000334121 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
SREK1-202ENST00000334121 NEBP20929 6669 aa2.4□□□□□ -2.03
SREK1-202ENST00000334121 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
SREK1-202ENST00000334121 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
SREK1-202ENST00000334121 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
SREK1-202ENST00000334121 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
SREK1-202ENST00000334121 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
SREK1-202ENST00000334121 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
SREK1-202ENST00000334121 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
SREK1-202ENST00000334121 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
SREK1-202ENST00000334121 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
SREK1-202ENST00000334121 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
SREK1-202ENST00000334121 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
SREK1-202ENST00000334121 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
SREK1-202ENST00000334121 KRTAP5-2Q701N4 177 aa1.64□□□□□ -2.15
SREK1-202ENST00000334121 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
SREK1-202ENST00000334121 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
SREK1-202ENST00000334121 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
SREK1-202ENST00000334121 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
SREK1-202ENST00000334121 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
SREK1-202ENST00000334121 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
SREK1-202ENST00000334121 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
SREK1-202ENST00000334121 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
SREK1-202ENST00000334121 KRTAP5-7Q6L8G8 165 aa1.12□□□□□ -2.23
SREK1-202ENST00000334121 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 70.2 ms