RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
SLIT3-201ENST00000332966 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
SLIT3-201ENST00000332966 FAT4Q6V0I7 4981 aa4.86□□□□□ -1.63
SLIT3-201ENST00000332966 MUC2Q02817 5179 aa4.85□□□□□ -1.63
SLIT3-201ENST00000332966 PRM1P04553 51 aa4.82□□□□□ -1.64
SLIT3-201ENST00000332966 SPRR2EP22531 72 aa4.81□□□□□ -1.64
SLIT3-201ENST00000332966 SPRR2BP35325 72 aa4.81□□□□□ -1.64
SLIT3-201ENST00000332966 SPRR2AP35326 72 aa4.81□□□□□ -1.64
SLIT3-201ENST00000332966 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
SLIT3-201ENST00000332966 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
SLIT3-201ENST00000332966 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
SLIT3-201ENST00000332966 KRTAP19-6Q3LI70 58 aa4.71□□□□□ -1.66
SLIT3-201ENST00000332966 SPRR2DP22532 72 aa4.63□□□□□ -1.67
SLIT3-201ENST00000332966 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.68
SLIT3-201ENST00000332966 MT3P25713 68 aa4.58□□□□□ -1.68
SLIT3-201ENST00000332966 MT1AP04731 61 aa4.58□□□□□ -1.68
SLIT3-201ENST00000332966 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
SLIT3-201ENST00000332966 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
SLIT3-201ENST00000332966 LCE2DQ5TA82 110 aaPredicted RBP4.43□□□□□ -1.7
SLIT3-201ENST00000332966 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
SLIT3-201ENST00000332966 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
SLIT3-201ENST00000332966 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
SLIT3-201ENST00000332966 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
SLIT3-201ENST00000332966 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
SLIT3-201ENST00000332966 USH2AO75445 5202 aa4.28□□□□□ -1.72
SLIT3-201ENST00000332966 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
SLIT3-201ENST00000332966 FCGBPQ9Y6R7 5405 aaPredicted RBP4.22□□□□□ -1.73
SLIT3-201ENST00000332966 KMT2DO14686 5537 aa4.21□□□□□ -1.74
SLIT3-201ENST00000332966 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
SLIT3-201ENST00000332966 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
SLIT3-201ENST00000332966 MT4P47944 62 aa4.09□□□□□ -1.76
SLIT3-201ENST00000332966 LCE1DQ5T752 114 aa4.09□□□□□ -1.76
SLIT3-201ENST00000332966 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
SLIT3-201ENST00000332966 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
SLIT3-201ENST00000332966 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
SLIT3-201ENST00000332966 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
SLIT3-201ENST00000332966 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
SLIT3-201ENST00000332966 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
SLIT3-201ENST00000332966 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
SLIT3-201ENST00000332966 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
SLIT3-201ENST00000332966 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
SLIT3-201ENST00000332966 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
SLIT3-201ENST00000332966 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
SLIT3-201ENST00000332966 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
SLIT3-201ENST00000332966 KRTAP5-9P26371 169 aa3.58□□□□□ -1.84
SLIT3-201ENST00000332966 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
SLIT3-201ENST00000332966 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
SLIT3-201ENST00000332966 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
SLIT3-201ENST00000332966 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.88
SLIT3-201ENST00000332966 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
SLIT3-201ENST00000332966 NEBP20929 6669 aa3.31□□□□□ -1.88
SLIT3-201ENST00000332966 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
SLIT3-201ENST00000332966 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
SLIT3-201ENST00000332966 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
SLIT3-201ENST00000332966 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
SLIT3-201ENST00000332966 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
SLIT3-201ENST00000332966 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
SLIT3-201ENST00000332966 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
SLIT3-201ENST00000332966 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
SLIT3-201ENST00000332966 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
SLIT3-201ENST00000332966 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
SLIT3-201ENST00000332966 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
SLIT3-201ENST00000332966 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
SLIT3-201ENST00000332966 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
SLIT3-201ENST00000332966 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
SLIT3-201ENST00000332966 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
SLIT3-201ENST00000332966 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
SLIT3-201ENST00000332966 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
SLIT3-201ENST00000332966 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
SLIT3-201ENST00000332966 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
SLIT3-201ENST00000332966 KRTAP5-8O75690 187 aa2.34□□□□□ -2.04
SLIT3-201ENST00000332966 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
SLIT3-201ENST00000332966 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
SLIT3-201ENST00000332966 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
SLIT3-201ENST00000332966 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
SLIT3-201ENST00000332966 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
SLIT3-201ENST00000332966 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms