RNA–Protein interactions for RNA: ENST00000330560.7

CDCA2-201, Transcript of cell division cycle associated 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCA2, Length 3,731 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-201ENST00000330560 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
CDCA2-201ENST00000330560 MT1EP04732 61 aa5.13□□□□□ -1.59
CDCA2-201ENST00000330560 MT1LQ93083 61 aa5.12□□□□□ -1.59
CDCA2-201ENST00000330560 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
CDCA2-201ENST00000330560 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
CDCA2-201ENST00000330560 MT1GP13640 62 aa5.09□□□□□ -1.6
CDCA2-201ENST00000330560 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.6
CDCA2-201ENST00000330560 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
CDCA2-201ENST00000330560 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
CDCA2-201ENST00000330560 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
CDCA2-201ENST00000330560 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
CDCA2-201ENST00000330560 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
CDCA2-201ENST00000330560 MT1MQ8N339 61 aa4.84□□□□□ -1.63
CDCA2-201ENST00000330560 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
CDCA2-201ENST00000330560 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
CDCA2-201ENST00000330560 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
CDCA2-201ENST00000330560 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
CDCA2-201ENST00000330560 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
CDCA2-201ENST00000330560 SPRR2EP22531 72 aa4.63□□□□□ -1.67
CDCA2-201ENST00000330560 SPRR2BP35325 72 aa4.63□□□□□ -1.67
CDCA2-201ENST00000330560 SPRR2AP35326 72 aa4.63□□□□□ -1.67
CDCA2-201ENST00000330560 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
CDCA2-201ENST00000330560 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
CDCA2-201ENST00000330560 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.68
CDCA2-201ENST00000330560 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
CDCA2-201ENST00000330560 KRTAP6-1Q3LI64 71 aa4.45□□□□□ -1.7
CDCA2-201ENST00000330560 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
CDCA2-201ENST00000330560 SPRR2DP22532 72 aa4.4□□□□□ -1.7
CDCA2-201ENST00000330560 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
CDCA2-201ENST00000330560 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
CDCA2-201ENST00000330560 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
CDCA2-201ENST00000330560 MT1AP04731 61 aa4.25□□□□□ -1.73
CDCA2-201ENST00000330560 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
CDCA2-201ENST00000330560 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
CDCA2-201ENST00000330560 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
CDCA2-201ENST00000330560 MT4P47944 62 aa4.1□□□□□ -1.75
CDCA2-201ENST00000330560 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
CDCA2-201ENST00000330560 PRM1P04553 51 aa4.04□□□□□ -1.76
CDCA2-201ENST00000330560 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
CDCA2-201ENST00000330560 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
CDCA2-201ENST00000330560 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
CDCA2-201ENST00000330560 MT3P25713 68 aa3.96□□□□□ -1.78
CDCA2-201ENST00000330560 NEBP20929 6669 aa3.9□□□□□ -1.79
CDCA2-201ENST00000330560 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.81
CDCA2-201ENST00000330560 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
CDCA2-201ENST00000330560 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
CDCA2-201ENST00000330560 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
CDCA2-201ENST00000330560 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
CDCA2-201ENST00000330560 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
CDCA2-201ENST00000330560 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.83
CDCA2-201ENST00000330560 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
CDCA2-201ENST00000330560 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
CDCA2-201ENST00000330560 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
CDCA2-201ENST00000330560 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
CDCA2-201ENST00000330560 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
CDCA2-201ENST00000330560 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
CDCA2-201ENST00000330560 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
CDCA2-201ENST00000330560 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
CDCA2-201ENST00000330560 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
CDCA2-201ENST00000330560 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
CDCA2-201ENST00000330560 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
CDCA2-201ENST00000330560 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
CDCA2-201ENST00000330560 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
CDCA2-201ENST00000330560 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
CDCA2-201ENST00000330560 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
CDCA2-201ENST00000330560 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
CDCA2-201ENST00000330560 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CDCA2-201ENST00000330560 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
CDCA2-201ENST00000330560 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
CDCA2-201ENST00000330560 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
CDCA2-201ENST00000330560 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
CDCA2-201ENST00000330560 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
CDCA2-201ENST00000330560 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
CDCA2-201ENST00000330560 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
CDCA2-201ENST00000330560 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
CDCA2-201ENST00000330560 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
CDCA2-201ENST00000330560 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 143.1 ms