RNA–Protein interactions for RNA: ENST00000328834.9

CNOT10-201, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT10, Length 2,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-201ENST00000328834 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
CNOT10-201ENST00000328834 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
CNOT10-201ENST00000328834 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
CNOT10-201ENST00000328834 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
CNOT10-201ENST00000328834 MT1GP13640 62 aa4.93□□□□□ -1.62
CNOT10-201ENST00000328834 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
CNOT10-201ENST00000328834 SYNE1Q8NF91 8797 aaKnown RBP4.84□□□□□ -1.63
CNOT10-201ENST00000328834 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.65
CNOT10-201ENST00000328834 MT1MQ8N339 61 aa4.74□□□□□ -1.65
CNOT10-201ENST00000328834 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
CNOT10-201ENST00000328834 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
CNOT10-201ENST00000328834 SYNE2Q8WXH0 6885 aaKnown RBP4.69□□□□□ -1.66
CNOT10-201ENST00000328834 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
CNOT10-201ENST00000328834 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
CNOT10-201ENST00000328834 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.66
CNOT10-201ENST00000328834 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
CNOT10-201ENST00000328834 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
CNOT10-201ENST00000328834 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
CNOT10-201ENST00000328834 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
CNOT10-201ENST00000328834 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
CNOT10-201ENST00000328834 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
CNOT10-201ENST00000328834 KRTAP9-2Q9BYQ4 174 aa4.28□□□□□ -1.72
CNOT10-201ENST00000328834 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
CNOT10-201ENST00000328834 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
CNOT10-201ENST00000328834 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
CNOT10-201ENST00000328834 MT1AP04731 61 aa4.17□□□□□ -1.74
CNOT10-201ENST00000328834 SPRR2EP22531 72 aa4.13□□□□□ -1.75
CNOT10-201ENST00000328834 SPRR2BP35325 72 aa4.13□□□□□ -1.75
CNOT10-201ENST00000328834 SPRR2AP35326 72 aa4.13□□□□□ -1.75
CNOT10-201ENST00000328834 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
CNOT10-201ENST00000328834 PRM1P04553 51 aa4.12□□□□□ -1.75
CNOT10-201ENST00000328834 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
CNOT10-201ENST00000328834 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
CNOT10-201ENST00000328834 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
CNOT10-201ENST00000328834 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
CNOT10-201ENST00000328834 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
CNOT10-201ENST00000328834 SPRR2DP22532 72 aa3.92□□□□□ -1.78
CNOT10-201ENST00000328834 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
CNOT10-201ENST00000328834 MT3P25713 68 aa3.74□□□□□ -1.81
CNOT10-201ENST00000328834 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
CNOT10-201ENST00000328834 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
CNOT10-201ENST00000328834 MT4P47944 62 aa3.65□□□□□ -1.83
CNOT10-201ENST00000328834 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
CNOT10-201ENST00000328834 NEBP20929 6669 aa3.52□□□□□ -1.85
CNOT10-201ENST00000328834 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
CNOT10-201ENST00000328834 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
CNOT10-201ENST00000328834 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
CNOT10-201ENST00000328834 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
CNOT10-201ENST00000328834 LCE1DQ5T752 114 aa3.36□□□□□ -1.87
CNOT10-201ENST00000328834 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
CNOT10-201ENST00000328834 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
CNOT10-201ENST00000328834 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
CNOT10-201ENST00000328834 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
CNOT10-201ENST00000328834 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
CNOT10-201ENST00000328834 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.9
CNOT10-201ENST00000328834 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
CNOT10-201ENST00000328834 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
CNOT10-201ENST00000328834 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
CNOT10-201ENST00000328834 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
CNOT10-201ENST00000328834 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
CNOT10-201ENST00000328834 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
CNOT10-201ENST00000328834 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
CNOT10-201ENST00000328834 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
CNOT10-201ENST00000328834 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
CNOT10-201ENST00000328834 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
CNOT10-201ENST00000328834 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
CNOT10-201ENST00000328834 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
CNOT10-201ENST00000328834 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
CNOT10-201ENST00000328834 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
CNOT10-201ENST00000328834 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
CNOT10-201ENST00000328834 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
CNOT10-201ENST00000328834 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
CNOT10-201ENST00000328834 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
CNOT10-201ENST00000328834 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
CNOT10-201ENST00000328834 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
CNOT10-201ENST00000328834 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
CNOT10-201ENST00000328834 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 149.5 ms