RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
FN1-201ENST00000323926 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
FN1-201ENST00000323926 LCE2AQ5TA79 106 aaPredicted RBP3.53□□□□□ -1.84
FN1-201ENST00000323926 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
FN1-201ENST00000323926 KRTAP9-6A0A140TA67 174 aa3.51□□□□□ -1.85
FN1-201ENST00000323926 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
FN1-201ENST00000323926 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
FN1-201ENST00000323926 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.87
FN1-201ENST00000323926 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
FN1-201ENST00000323926 KMT2CQ8NEZ4 4911 aaKnown RBP3.39□□□□□ -1.87
FN1-201ENST00000323926 RYR2Q92736 4967 aa3.38□□□□□ -1.87
FN1-201ENST00000323926 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
FN1-201ENST00000323926 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.87
FN1-201ENST00000323926 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
FN1-201ENST00000323926 BIRC6Q9NR09 4857 aa3.31□□□□□ -1.88
FN1-201ENST00000323926 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
FN1-201ENST00000323926 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
FN1-201ENST00000323926 HERC2O95714 4834 aa3.25□□□□□ -1.89
FN1-201ENST00000323926 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
FN1-201ENST00000323926 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
FN1-201ENST00000323926 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
FN1-201ENST00000323926 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
FN1-201ENST00000323926 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
FN1-201ENST00000323926 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
FN1-201ENST00000323926 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
FN1-201ENST00000323926 HERC1Q15751 4861 aa3.11□□□□□ -1.91
FN1-201ENST00000323926 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
FN1-201ENST00000323926 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
FN1-201ENST00000323926 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
FN1-201ENST00000323926 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
FN1-201ENST00000323926 KRTAP5-9P26371 169 aa3□□□□□ -1.93
FN1-201ENST00000323926 KIAA1109Q2LD37 5005 aa2.98□□□□□ -1.93
FN1-201ENST00000323926 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
FN1-201ENST00000323926 EPPK1P58107 5090 aaKnown RBP2.85□□□□□ -1.95
FN1-201ENST00000323926 FSIP2Q5CZC0 6907 aa2.8□□□□□ -1.96
FN1-201ENST00000323926 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
FN1-201ENST00000323926 RNF213Q63HN8 5207 aa2.72□□□□□ -1.97
FN1-201ENST00000323926 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
FN1-201ENST00000323926 FAT4Q6V0I7 4981 aa2.59□□□□□ -1.99
FN1-201ENST00000323926 MUC2Q02817 5179 aa2.59□□□□□ -2
FN1-201ENST00000323926 ABCA13Q86UQ4 5058 aa2.57□□□□□ -2
FN1-201ENST00000323926 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
FN1-201ENST00000323926 KRTAP4-11Q9BYQ6 195 aa2.55□□□□□ -2
FN1-201ENST00000323926 UBR4Q5T4S7 5183 aa2.54□□□□□ -2
FN1-201ENST00000323926 NEBP20929 6669 aa2.49□□□□□ -2.01
FN1-201ENST00000323926 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
FN1-201ENST00000323926 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.02
FN1-201ENST00000323926 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
FN1-201ENST00000323926 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
FN1-201ENST00000323926 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
FN1-201ENST00000323926 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
FN1-201ENST00000323926 KMT2DO14686 5537 aa2.27□□□□□ -2.05
FN1-201ENST00000323926 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
FN1-201ENST00000323926 KRTAP4-12Q9BQ66 201 aa2.23□□□□□ -2.05
FN1-201ENST00000323926 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
FN1-201ENST00000323926 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
FN1-201ENST00000323926 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
FN1-201ENST00000323926 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
FN1-201ENST00000323926 USH2AO75445 5202 aa2.1□□□□□ -2.07
FN1-201ENST00000323926 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
FN1-201ENST00000323926 KRTAP5-2Q701N4 177 aa2.06□□□□□ -2.08
FN1-201ENST00000323926 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
FN1-201ENST00000323926 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
FN1-201ENST00000323926 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
FN1-201ENST00000323926 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
FN1-201ENST00000323926 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
FN1-201ENST00000323926 MUC12Q9UKN1 5478 aa1.91□□□□□ -2.1
FN1-201ENST00000323926 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
FN1-201ENST00000323926 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
FN1-201ENST00000323926 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
FN1-201ENST00000323926 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
FN1-201ENST00000323926 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
FN1-201ENST00000323926 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
FN1-201ENST00000323926 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
FN1-201ENST00000323926 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.16
FN1-201ENST00000323926 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
FN1-201ENST00000323926 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 13.3 ms