RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
HNF4A-201ENST00000316099 MT1EP04732 61 aa3.63□□□□□ -1.83
HNF4A-201ENST00000316099 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
HNF4A-201ENST00000316099 MT1LQ93083 61 aa3.6□□□□□ -1.83
HNF4A-201ENST00000316099 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
HNF4A-201ENST00000316099 USH2AO75445 5202 aa3.56□□□□□ -1.84
HNF4A-201ENST00000316099 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
HNF4A-201ENST00000316099 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
HNF4A-201ENST00000316099 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
HNF4A-201ENST00000316099 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
HNF4A-201ENST00000316099 KMT2DO14686 5537 aa3.5□□□□□ -1.85
HNF4A-201ENST00000316099 MT1MQ8N339 61 aa3.45□□□□□ -1.86
HNF4A-201ENST00000316099 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
HNF4A-201ENST00000316099 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
HNF4A-201ENST00000316099 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
HNF4A-201ENST00000316099 MT4P47944 62 aa3.42□□□□□ -1.86
HNF4A-201ENST00000316099 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
HNF4A-201ENST00000316099 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
HNF4A-201ENST00000316099 PRM1P04553 51 aa3.3□□□□□ -1.88
HNF4A-201ENST00000316099 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.89
HNF4A-201ENST00000316099 SYNE2Q8WXH0 6885 aaKnown RBP3.27□□□□□ -1.89
HNF4A-201ENST00000316099 LCE5AQ5TCM9 118 aa3.26□□□□□ -1.89
HNF4A-201ENST00000316099 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
HNF4A-201ENST00000316099 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
HNF4A-201ENST00000316099 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
HNF4A-201ENST00000316099 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
HNF4A-201ENST00000316099 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
HNF4A-201ENST00000316099 MT3P25713 68 aa3.21□□□□□ -1.9
HNF4A-201ENST00000316099 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
HNF4A-201ENST00000316099 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
HNF4A-201ENST00000316099 KRTAP4-9Q9BYQ8 210 aa3.14□□□□□ -1.91
HNF4A-201ENST00000316099 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
HNF4A-201ENST00000316099 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
HNF4A-201ENST00000316099 MT1AP04731 61 aa3.09□□□□□ -1.91
HNF4A-201ENST00000316099 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
HNF4A-201ENST00000316099 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
HNF4A-201ENST00000316099 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
HNF4A-201ENST00000316099 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
HNF4A-201ENST00000316099 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
HNF4A-201ENST00000316099 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
HNF4A-201ENST00000316099 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
HNF4A-201ENST00000316099 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
HNF4A-201ENST00000316099 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
HNF4A-201ENST00000316099 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.94
HNF4A-201ENST00000316099 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
HNF4A-201ENST00000316099 LCE4AQ5TA78 99 aa2.81□□□□□ -1.96
HNF4A-201ENST00000316099 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
HNF4A-201ENST00000316099 NEBP20929 6669 aa2.8□□□□□ -1.96
HNF4A-201ENST00000316099 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.97
HNF4A-201ENST00000316099 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
HNF4A-201ENST00000316099 KRTAP4-6Q9BYQ5 205 aa2.71□□□□□ -1.98
HNF4A-201ENST00000316099 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
HNF4A-201ENST00000316099 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
HNF4A-201ENST00000316099 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
HNF4A-201ENST00000316099 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
HNF4A-201ENST00000316099 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
HNF4A-201ENST00000316099 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
HNF4A-201ENST00000316099 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
HNF4A-201ENST00000316099 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
HNF4A-201ENST00000316099 KRTAP5-3Q6L8H2 238 aa2.31□□□□□ -2.04
HNF4A-201ENST00000316099 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
HNF4A-201ENST00000316099 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
HNF4A-201ENST00000316099 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
HNF4A-201ENST00000316099 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
HNF4A-201ENST00000316099 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
HNF4A-201ENST00000316099 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.09
HNF4A-201ENST00000316099 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
HNF4A-201ENST00000316099 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
HNF4A-201ENST00000316099 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
HNF4A-201ENST00000316099 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
HNF4A-201ENST00000316099 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
HNF4A-201ENST00000316099 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
HNF4A-201ENST00000316099 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
HNF4A-201ENST00000316099 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
HNF4A-201ENST00000316099 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
HNF4A-201ENST00000316099 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
HNF4A-201ENST00000316099 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 138.6 ms