RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 LCE3AQ5TA76 89 aa2.52□□□□□ -2.01
SPATA9-202ENST00000316087 KRTAP10-10P60014 251 aa2.51□□□□□ -2.01
SPATA9-202ENST00000316087 HERC1Q15751 4861 aa2.5□□□□□ -2.01
SPATA9-202ENST00000316087 MT1HP80294 61 aa2.49□□□□□ -2.01
SPATA9-202ENST00000316087 MT2AP02795 61 aa2.47□□□□□ -2.01
SPATA9-202ENST00000316087 UBR4Q5T4S7 5183 aa2.46□□□□□ -2.02
SPATA9-202ENST00000316087 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
SPATA9-202ENST00000316087 KRTAP10-12P60413 245 aa2.46□□□□□ -2.02
SPATA9-202ENST00000316087 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
SPATA9-202ENST00000316087 MT1FP04733 61 aa2.44□□□□□ -2.02
SPATA9-202ENST00000316087 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
SPATA9-202ENST00000316087 MT1XP80297 61 aa2.4□□□□□ -2.02
SPATA9-202ENST00000316087 MT1BP07438 61 aa2.4□□□□□ -2.03
SPATA9-202ENST00000316087 MUC2Q02817 5179 aa2.35□□□□□ -2.03
SPATA9-202ENST00000316087 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
SPATA9-202ENST00000316087 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
SPATA9-202ENST00000316087 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
SPATA9-202ENST00000316087 KRTAP19-5Q3LI72 72 aa2.26□□□□□ -2.05
SPATA9-202ENST00000316087 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
SPATA9-202ENST00000316087 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
SPATA9-202ENST00000316087 RNF213Q63HN8 5207 aa2.24□□□□□ -2.05
SPATA9-202ENST00000316087 FAT4Q6V0I7 4981 aa2.22□□□□□ -2.05
SPATA9-202ENST00000316087 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
SPATA9-202ENST00000316087 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
SPATA9-202ENST00000316087 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
SPATA9-202ENST00000316087 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
SPATA9-202ENST00000316087 KRTAP19-7Q3SYF9 63 aa2.15□□□□□ -2.07
SPATA9-202ENST00000316087 MT1LQ93083 61 aa2.11□□□□□ -2.07
SPATA9-202ENST00000316087 MT1EP04732 61 aa2.1□□□□□ -2.07
SPATA9-202ENST00000316087 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
SPATA9-202ENST00000316087 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
SPATA9-202ENST00000316087 KRTAP19-6Q3LI70 58 aa2.04□□□□□ -2.08
SPATA9-202ENST00000316087 MT1GP13640 62 aa2.02□□□□□ -2.09
SPATA9-202ENST00000316087 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
SPATA9-202ENST00000316087 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
SPATA9-202ENST00000316087 MT1MQ8N339 61 aa1.96□□□□□ -2.1
SPATA9-202ENST00000316087 CRCT1Q9UGL9 99 aa1.96□□□□□ -2.1
SPATA9-202ENST00000316087 FSIP2Q5CZC0 6907 aa1.95□□□□□ -2.1
SPATA9-202ENST00000316087 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
SPATA9-202ENST00000316087 MT1AP04731 61 aa1.93□□□□□ -2.1
SPATA9-202ENST00000316087 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
SPATA9-202ENST00000316087 USH2AO75445 5202 aa1.91□□□□□ -2.1
SPATA9-202ENST00000316087 SSPOA2VEC9 5147 aa1.87□□□□□ -2.11
SPATA9-202ENST00000316087 KMT2DO14686 5537 aa1.87□□□□□ -2.11
SPATA9-202ENST00000316087 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
SPATA9-202ENST00000316087 SPRR2FQ96RM1 72 aa1.83□□□□□ -2.12
SPATA9-202ENST00000316087 FCGBPQ9Y6R7 5405 aaPredicted RBP1.78□□□□□ -2.12
SPATA9-202ENST00000316087 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
SPATA9-202ENST00000316087 NEBP20929 6669 aa1.77□□□□□ -2.13
SPATA9-202ENST00000316087 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
SPATA9-202ENST00000316087 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
SPATA9-202ENST00000316087 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
SPATA9-202ENST00000316087 MACF1Q9UPN3 7388 aaKnown RBP1.73□□□□□ -2.13
SPATA9-202ENST00000316087 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
SPATA9-202ENST00000316087 SYNE2Q8WXH0 6885 aaKnown RBP1.72□□□□□ -2.13
SPATA9-202ENST00000316087 PRM1P04553 51 aa1.69□□□□□ -2.14
SPATA9-202ENST00000316087 SPRR2AP35326 72 aa1.66□□□□□ -2.14
SPATA9-202ENST00000316087 SPRR2EP22531 72 aa1.65□□□□□ -2.15
SPATA9-202ENST00000316087 SPRR2BP35325 72 aa1.65□□□□□ -2.15
SPATA9-202ENST00000316087 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.15
SPATA9-202ENST00000316087 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
SPATA9-202ENST00000316087 MDN1Q9NU22 5596 aa1.59□□□□□ -2.16
SPATA9-202ENST00000316087 SPRR2DP22532 72 aa1.59□□□□□ -2.16
SPATA9-202ENST00000316087 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
SPATA9-202ENST00000316087 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.16
SPATA9-202ENST00000316087 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
SPATA9-202ENST00000316087 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
SPATA9-202ENST00000316087 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
SPATA9-202ENST00000316087 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
SPATA9-202ENST00000316087 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
SPATA9-202ENST00000316087 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
SPATA9-202ENST00000316087 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
SPATA9-202ENST00000316087 MT4P47944 62 aa1.32□□□□□ -2.2
SPATA9-202ENST00000316087 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
SPATA9-202ENST00000316087 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
SPATA9-202ENST00000316087 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
SPATA9-202ENST00000316087 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
SPATA9-202ENST00000316087 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 56.5 ms