RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 KRTAP9-6A8MVA2 160 aa6.62□□□□□ -1.35
CD55-201ENST00000314754 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
CD55-201ENST00000314754 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.37
CD55-201ENST00000314754 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
CD55-201ENST00000314754 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
CD55-201ENST00000314754 KRTAP19-3Q7Z4W3 81 aa6.42□□□□□ -1.38
CD55-201ENST00000314754 KRTAP9-6A0A140TA67 174 aa6.4□□□□□ -1.38
CD55-201ENST00000314754 KRTAP4-3Q9BYR4 195 aa6.39□□□□□ -1.39
CD55-201ENST00000314754 MT1GP13640 62 aa6.38□□□□□ -1.39
CD55-201ENST00000314754 MT1MQ8N339 61 aa6.34□□□□□ -1.39
CD55-201ENST00000314754 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
CD55-201ENST00000314754 SYNE2Q8WXH0 6885 aaKnown RBP6.3□□□□□ -1.4
CD55-201ENST00000314754 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
CD55-201ENST00000314754 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
CD55-201ENST00000314754 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
CD55-201ENST00000314754 KRTAP2-1Q9BYU5 128 aa6.25□□□□□ -1.41
CD55-201ENST00000314754 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
CD55-201ENST00000314754 CRCT1Q9UGL9 99 aa6.23□□□□□ -1.41
CD55-201ENST00000314754 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
CD55-201ENST00000314754 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
CD55-201ENST00000314754 KRTAP9-9Q9BYP9 154 aa6.1□□□□□ -1.43
CD55-201ENST00000314754 KRTAP9-4Q9BYQ2 154 aa6.1□□□□□ -1.43
CD55-201ENST00000314754 KRTAP5-9P26371 169 aa6.09□□□□□ -1.44
CD55-201ENST00000314754 KRTAP4-12Q9BQ66 201 aa6.01□□□□□ -1.45
CD55-201ENST00000314754 LCE1AQ5T7P2 110 aa5.98□□□□□ -1.45
CD55-201ENST00000314754 SPRR2EP22531 72 aa5.86□□□□□ -1.47
CD55-201ENST00000314754 SPRR2BP35325 72 aa5.86□□□□□ -1.47
CD55-201ENST00000314754 SPRR2AP35326 72 aa5.86□□□□□ -1.47
CD55-201ENST00000314754 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
CD55-201ENST00000314754 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
CD55-201ENST00000314754 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
CD55-201ENST00000314754 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
CD55-201ENST00000314754 MT1AP04731 61 aa5.68□□□□□ -1.5
CD55-201ENST00000314754 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
CD55-201ENST00000314754 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
CD55-201ENST00000314754 SPRR2DP22532 72 aa5.63□□□□□ -1.51
CD55-201ENST00000314754 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
CD55-201ENST00000314754 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
CD55-201ENST00000314754 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
CD55-201ENST00000314754 KRTAP4-11Q9BYQ6 195 aa5.41□□□□□ -1.54
CD55-201ENST00000314754 NEBP20929 6669 aa5.39□□□□□ -1.55
CD55-201ENST00000314754 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
CD55-201ENST00000314754 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
CD55-201ENST00000314754 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
CD55-201ENST00000314754 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.58
CD55-201ENST00000314754 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
CD55-201ENST00000314754 MT3P25713 68 aa5.12□□□□□ -1.59
CD55-201ENST00000314754 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
CD55-201ENST00000314754 MT4P47944 62 aa4.96□□□□□ -1.62
CD55-201ENST00000314754 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
CD55-201ENST00000314754 PRM1P04553 51 aa4.87□□□□□ -1.63
CD55-201ENST00000314754 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
CD55-201ENST00000314754 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
CD55-201ENST00000314754 HMCN1Q96RW7 5635 aa4.85□□□□□ -1.63
CD55-201ENST00000314754 KRTAP5-2Q701N4 177 aa4.79□□□□□ -1.64
CD55-201ENST00000314754 KRTAP20-1Q3LI63 56 aa4.7□□□□□ -1.66
CD55-201ENST00000314754 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
CD55-201ENST00000314754 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
CD55-201ENST00000314754 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
CD55-201ENST00000314754 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.76
CD55-201ENST00000314754 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.76
CD55-201ENST00000314754 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
CD55-201ENST00000314754 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
CD55-201ENST00000314754 AHNAK2Q8IVF2 5795 aa4.03□□□□□ -1.76
CD55-201ENST00000314754 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
CD55-201ENST00000314754 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
CD55-201ENST00000314754 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
CD55-201ENST00000314754 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
CD55-201ENST00000314754 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
CD55-201ENST00000314754 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
CD55-201ENST00000314754 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
CD55-201ENST00000314754 KRTAP21-1Q3LI58 79 aa3.18□□□□□ -1.9
CD55-201ENST00000314754 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
CD55-201ENST00000314754 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
CD55-201ENST00000314754 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
CD55-201ENST00000314754 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
CD55-201ENST00000314754 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 93.5 ms