RNA–Protein interactions for RNA: ENST00000311785.11

SEC31A-202, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC31A, Length 3,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-202ENST00000311785 MUC12Q9UKN1 5478 aa4.23□□□□□ -1.73
SEC31A-202ENST00000311785 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
SEC31A-202ENST00000311785 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
SEC31A-202ENST00000311785 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
SEC31A-202ENST00000311785 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
SEC31A-202ENST00000311785 MT1EP04732 61 aa4.18□□□□□ -1.74
SEC31A-202ENST00000311785 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
SEC31A-202ENST00000311785 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
SEC31A-202ENST00000311785 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
SEC31A-202ENST00000311785 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
SEC31A-202ENST00000311785 SSPOA2VEC9 5147 aa4.04□□□□□ -1.76
SEC31A-202ENST00000311785 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
SEC31A-202ENST00000311785 MT1MQ8N339 61 aa3.93□□□□□ -1.78
SEC31A-202ENST00000311785 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.78
SEC31A-202ENST00000311785 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
SEC31A-202ENST00000311785 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
SEC31A-202ENST00000311785 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
SEC31A-202ENST00000311785 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
SEC31A-202ENST00000311785 PRM1P04553 51 aa3.76□□□□□ -1.81
SEC31A-202ENST00000311785 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
SEC31A-202ENST00000311785 KRTAP9-7A8MTY7 169 aa3.74□□□□□ -1.81
SEC31A-202ENST00000311785 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
SEC31A-202ENST00000311785 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
SEC31A-202ENST00000311785 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
SEC31A-202ENST00000311785 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
SEC31A-202ENST00000311785 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
SEC31A-202ENST00000311785 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
SEC31A-202ENST00000311785 MT1AP04731 61 aa3.49□□□□□ -1.85
SEC31A-202ENST00000311785 SPRR2EP22531 72 aa3.49□□□□□ -1.85
SEC31A-202ENST00000311785 SPRR2BP35325 72 aa3.49□□□□□ -1.85
SEC31A-202ENST00000311785 SPRR2AP35326 72 aa3.49□□□□□ -1.85
SEC31A-202ENST00000311785 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
SEC31A-202ENST00000311785 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
SEC31A-202ENST00000311785 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
SEC31A-202ENST00000311785 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
SEC31A-202ENST00000311785 SPRR2DP22532 72 aa3.3□□□□□ -1.88
SEC31A-202ENST00000311785 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
SEC31A-202ENST00000311785 MT3P25713 68 aa3.26□□□□□ -1.89
SEC31A-202ENST00000311785 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
SEC31A-202ENST00000311785 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
SEC31A-202ENST00000311785 MT4P47944 62 aa3.13□□□□□ -1.91
SEC31A-202ENST00000311785 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
SEC31A-202ENST00000311785 NEBP20929 6669 aa3.09□□□□□ -1.91
SEC31A-202ENST00000311785 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
SEC31A-202ENST00000311785 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
SEC31A-202ENST00000311785 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
SEC31A-202ENST00000311785 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
SEC31A-202ENST00000311785 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
SEC31A-202ENST00000311785 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.94
SEC31A-202ENST00000311785 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
SEC31A-202ENST00000311785 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
SEC31A-202ENST00000311785 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
SEC31A-202ENST00000311785 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
SEC31A-202ENST00000311785 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
SEC31A-202ENST00000311785 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
SEC31A-202ENST00000311785 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
SEC31A-202ENST00000311785 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
SEC31A-202ENST00000311785 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
SEC31A-202ENST00000311785 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
SEC31A-202ENST00000311785 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
SEC31A-202ENST00000311785 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
SEC31A-202ENST00000311785 KRTAP4-12Q9BQ66 201 aa2.29□□□□□ -2.04
SEC31A-202ENST00000311785 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
SEC31A-202ENST00000311785 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
SEC31A-202ENST00000311785 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
SEC31A-202ENST00000311785 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
SEC31A-202ENST00000311785 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
SEC31A-202ENST00000311785 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
SEC31A-202ENST00000311785 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
SEC31A-202ENST00000311785 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
SEC31A-202ENST00000311785 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
SEC31A-202ENST00000311785 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
SEC31A-202ENST00000311785 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
SEC31A-202ENST00000311785 KRTAP9-9Q9BYP9 154 aa1.87□□□□□ -2.11
SEC31A-202ENST00000311785 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
SEC31A-202ENST00000311785 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
SEC31A-202ENST00000311785 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 64.8 ms