RNA–Protein interactions for RNA: ENST00000311191.10

LRCH1-201, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 4,710 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-201ENST00000311191 KRTAP2-3P0C7H8 128 aa6.31□□□□□ -1.4
LRCH1-201ENST00000311191 KRTAP2-4Q9BYR9 128 aa6.31□□□□□ -1.4
LRCH1-201ENST00000311191 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
LRCH1-201ENST00000311191 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
LRCH1-201ENST00000311191 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
LRCH1-201ENST00000311191 MT1EP04732 61 aa6.14□□□□□ -1.43
LRCH1-201ENST00000311191 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
LRCH1-201ENST00000311191 MT1LQ93083 61 aa6.05□□□□□ -1.44
LRCH1-201ENST00000311191 KRTAP2-2Q9BYT5 123 aa6.05□□□□□ -1.44
LRCH1-201ENST00000311191 KRTAP2-1Q9BYU5 128 aa6.05□□□□□ -1.44
LRCH1-201ENST00000311191 MT1MQ8N339 61 aa5.94□□□□□ -1.46
LRCH1-201ENST00000311191 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
LRCH1-201ENST00000311191 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
LRCH1-201ENST00000311191 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
LRCH1-201ENST00000311191 MT4P47944 62 aa5.76□□□□□ -1.49
LRCH1-201ENST00000311191 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
LRCH1-201ENST00000311191 LCE4AQ5TA78 99 aa5.71□□□□□ -1.49
LRCH1-201ENST00000311191 MT3P25713 68 aa5.65□□□□□ -1.5
LRCH1-201ENST00000311191 MUC2Q02817 5179 aa5.62□□□□□ -1.51
LRCH1-201ENST00000311191 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
LRCH1-201ENST00000311191 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
LRCH1-201ENST00000311191 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
LRCH1-201ENST00000311191 USH2AO75445 5202 aa5.51□□□□□ -1.53
LRCH1-201ENST00000311191 MT1AP04731 61 aa5.5□□□□□ -1.53
LRCH1-201ENST00000311191 NEBP20929 6669 aa5.45□□□□□ -1.54
LRCH1-201ENST00000311191 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
LRCH1-201ENST00000311191 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
LRCH1-201ENST00000311191 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
LRCH1-201ENST00000311191 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
LRCH1-201ENST00000311191 GPR98Q8WXG9 6306 aa5.26□□□□□ -1.57
LRCH1-201ENST00000311191 FCGBPQ9Y6R7 5405 aaPredicted RBP5.23□□□□□ -1.57
LRCH1-201ENST00000311191 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
LRCH1-201ENST00000311191 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
LRCH1-201ENST00000311191 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
LRCH1-201ENST00000311191 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
LRCH1-201ENST00000311191 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
LRCH1-201ENST00000311191 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
LRCH1-201ENST00000311191 LCE1BQ5T7P3 118 aa5.01□□□□□ -1.61
LRCH1-201ENST00000311191 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
LRCH1-201ENST00000311191 KMT2DO14686 5537 aa4.95□□□□□ -1.62
LRCH1-201ENST00000311191 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
LRCH1-201ENST00000311191 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
LRCH1-201ENST00000311191 MDN1Q9NU22 5596 aa4.7□□□□□ -1.66
LRCH1-201ENST00000311191 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
LRCH1-201ENST00000311191 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
LRCH1-201ENST00000311191 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
LRCH1-201ENST00000311191 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
LRCH1-201ENST00000311191 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
LRCH1-201ENST00000311191 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
LRCH1-201ENST00000311191 MUC12Q9UKN1 5478 aa4.43□□□□□ -1.7
LRCH1-201ENST00000311191 PRM1P04553 51 aa4.37□□□□□ -1.71
LRCH1-201ENST00000311191 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
LRCH1-201ENST00000311191 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
LRCH1-201ENST00000311191 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
LRCH1-201ENST00000311191 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
LRCH1-201ENST00000311191 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
LRCH1-201ENST00000311191 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
LRCH1-201ENST00000311191 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
LRCH1-201ENST00000311191 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
LRCH1-201ENST00000311191 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
LRCH1-201ENST00000311191 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
LRCH1-201ENST00000311191 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
LRCH1-201ENST00000311191 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.81
LRCH1-201ENST00000311191 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
LRCH1-201ENST00000311191 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
LRCH1-201ENST00000311191 KRTAP5-10Q6L8G5 202 aa3.67□□□□□ -1.82
LRCH1-201ENST00000311191 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
LRCH1-201ENST00000311191 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
LRCH1-201ENST00000311191 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
LRCH1-201ENST00000311191 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
LRCH1-201ENST00000311191 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
LRCH1-201ENST00000311191 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
LRCH1-201ENST00000311191 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
LRCH1-201ENST00000311191 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
LRCH1-201ENST00000311191 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
LRCH1-201ENST00000311191 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
LRCH1-201ENST00000311191 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms