RNA–Protein interactions for RNA: ENST00000310942.8

CBX2-202, Transcript of chromobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX2, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX2-202ENST00000310942 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
CBX2-202ENST00000310942 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
CBX2-202ENST00000310942 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
CBX2-202ENST00000310942 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
CBX2-202ENST00000310942 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
CBX2-202ENST00000310942 OBSCNQ5VST9 7968 aa5.89□□□□□ -1.47
CBX2-202ENST00000310942 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
CBX2-202ENST00000310942 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
CBX2-202ENST00000310942 MT1MQ8N339 61 aa5.8□□□□□ -1.48
CBX2-202ENST00000310942 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
CBX2-202ENST00000310942 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
CBX2-202ENST00000310942 KRTAP2-1Q9BYU5 128 aa5.77□□□□□ -1.49
CBX2-202ENST00000310942 MUC12Q9UKN1 5478 aa5.7□□□□□ -1.5
CBX2-202ENST00000310942 SSPOA2VEC9 5147 aa5.64□□□□□ -1.51
CBX2-202ENST00000310942 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
CBX2-202ENST00000310942 SPRR2EP22531 72 aa5.63□□□□□ -1.51
CBX2-202ENST00000310942 SPRR2BP35325 72 aa5.63□□□□□ -1.51
CBX2-202ENST00000310942 SPRR2AP35326 72 aa5.63□□□□□ -1.51
CBX2-202ENST00000310942 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
CBX2-202ENST00000310942 LCE3DQ9BYE3 92 aa5.54□□□□□ -1.52
CBX2-202ENST00000310942 LCE2DQ5TA82 110 aaPredicted RBP5.53□□□□□ -1.52
CBX2-202ENST00000310942 LCE3EQ5T5B0 92 aa5.44□□□□□ -1.54
CBX2-202ENST00000310942 SPRR2DP22532 72 aa5.38□□□□□ -1.55
CBX2-202ENST00000310942 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
CBX2-202ENST00000310942 MACF1Q9UPN3 7388 aaKnown RBP5.32□□□□□ -1.56
CBX2-202ENST00000310942 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
CBX2-202ENST00000310942 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
CBX2-202ENST00000310942 PRM1P04553 51 aa5.22□□□□□ -1.57
CBX2-202ENST00000310942 MT1AP04731 61 aa5.22□□□□□ -1.57
CBX2-202ENST00000310942 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
CBX2-202ENST00000310942 MT3P25713 68 aa5.03□□□□□ -1.6
CBX2-202ENST00000310942 KRTAP9-7A8MTY7 169 aa5.01□□□□□ -1.61
CBX2-202ENST00000310942 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
CBX2-202ENST00000310942 MT4P47944 62 aa4.92□□□□□ -1.62
CBX2-202ENST00000310942 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
CBX2-202ENST00000310942 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
CBX2-202ENST00000310942 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
CBX2-202ENST00000310942 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
CBX2-202ENST00000310942 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
CBX2-202ENST00000310942 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
CBX2-202ENST00000310942 LCE1BQ5T7P3 118 aa4.58□□□□□ -1.68
CBX2-202ENST00000310942 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
CBX2-202ENST00000310942 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
CBX2-202ENST00000310942 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
CBX2-202ENST00000310942 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
CBX2-202ENST00000310942 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
CBX2-202ENST00000310942 NEBP20929 6669 aa4.19□□□□□ -1.74
CBX2-202ENST00000310942 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
CBX2-202ENST00000310942 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
CBX2-202ENST00000310942 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
CBX2-202ENST00000310942 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
CBX2-202ENST00000310942 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
CBX2-202ENST00000310942 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
CBX2-202ENST00000310942 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
CBX2-202ENST00000310942 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
CBX2-202ENST00000310942 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
CBX2-202ENST00000310942 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
CBX2-202ENST00000310942 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
CBX2-202ENST00000310942 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
CBX2-202ENST00000310942 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
CBX2-202ENST00000310942 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CBX2-202ENST00000310942 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CBX2-202ENST00000310942 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
CBX2-202ENST00000310942 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
CBX2-202ENST00000310942 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
CBX2-202ENST00000310942 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
CBX2-202ENST00000310942 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
CBX2-202ENST00000310942 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
CBX2-202ENST00000310942 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
CBX2-202ENST00000310942 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
CBX2-202ENST00000310942 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
CBX2-202ENST00000310942 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
CBX2-202ENST00000310942 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
CBX2-202ENST00000310942 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CBX2-202ENST00000310942 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
CBX2-202ENST00000310942 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
CBX2-202ENST00000310942 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 176.9 ms