RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 MT1GP13640 62 aa3.21□□□□□ -1.9
XCR1-201ENST00000309285 SPRR2DP22532 72 aa3.18□□□□□ -1.9
XCR1-201ENST00000309285 KRTAP4-7Q9BYR0 210 aa3.16□□□□□ -1.9
XCR1-201ENST00000309285 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
XCR1-201ENST00000309285 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
XCR1-201ENST00000309285 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
XCR1-201ENST00000309285 KRTAP19-6Q3LI70 58 aa3.11□□□□□ -1.91
XCR1-201ENST00000309285 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
XCR1-201ENST00000309285 MT1EP04732 61 aa3.11□□□□□ -1.91
XCR1-201ENST00000309285 MT1LQ93083 61 aa3.1□□□□□ -1.91
XCR1-201ENST00000309285 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
XCR1-201ENST00000309285 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
XCR1-201ENST00000309285 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
XCR1-201ENST00000309285 FCGBPQ9Y6R7 5405 aaPredicted RBP3□□□□□ -1.93
XCR1-201ENST00000309285 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
XCR1-201ENST00000309285 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
XCR1-201ENST00000309285 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
XCR1-201ENST00000309285 MT1MQ8N339 61 aa2.94□□□□□ -1.94
XCR1-201ENST00000309285 LOC100996750A0A140TA64 210 aa2.94□□□□□ -1.94
XCR1-201ENST00000309285 PRM1P04553 51 aa2.94□□□□□ -1.94
XCR1-201ENST00000309285 KRTAP9-2Q9BYQ4 174 aa2.92□□□□□ -1.94
XCR1-201ENST00000309285 MT4P47944 62 aa2.91□□□□□ -1.94
XCR1-201ENST00000309285 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
XCR1-201ENST00000309285 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
XCR1-201ENST00000309285 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
XCR1-201ENST00000309285 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
XCR1-201ENST00000309285 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
XCR1-201ENST00000309285 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
XCR1-201ENST00000309285 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
XCR1-201ENST00000309285 LCE5AQ5TCM9 118 aa2.78□□□□□ -1.96
XCR1-201ENST00000309285 KRTAP4-9Q9BYQ8 210 aa2.75□□□□□ -1.97
XCR1-201ENST00000309285 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
XCR1-201ENST00000309285 KRTAP9-6A0A140TA67 174 aa2.7□□□□□ -1.98
XCR1-201ENST00000309285 LCE1AQ5T7P2 110 aa2.69□□□□□ -1.98
XCR1-201ENST00000309285 MT1AP04731 61 aa2.64□□□□□ -1.99
XCR1-201ENST00000309285 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
XCR1-201ENST00000309285 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
XCR1-201ENST00000309285 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
XCR1-201ENST00000309285 KRTAP9-7A8MTY7 169 aa2.6□□□□□ -1.99
XCR1-201ENST00000309285 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.58□□□□□ -2
XCR1-201ENST00000309285 KRTAP5-9P26371 169 aa2.57□□□□□ -2
XCR1-201ENST00000309285 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
XCR1-201ENST00000309285 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
XCR1-201ENST00000309285 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
XCR1-201ENST00000309285 KRTAP9-4Q9BYQ2 154 aa2.46□□□□□ -2.02
XCR1-201ENST00000309285 LCE4AQ5TA78 99 aa2.42□□□□□ -2.02
XCR1-201ENST00000309285 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
XCR1-201ENST00000309285 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
XCR1-201ENST00000309285 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
XCR1-201ENST00000309285 KRTAP2-2Q9BYT5 123 aa2.39□□□□□ -2.03
XCR1-201ENST00000309285 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
XCR1-201ENST00000309285 NEBP20929 6669 aa2.33□□□□□ -2.04
XCR1-201ENST00000309285 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.04
XCR1-201ENST00000309285 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
XCR1-201ENST00000309285 KRTAP4-11Q9BYQ6 195 aa2.18□□□□□ -2.06
XCR1-201ENST00000309285 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
XCR1-201ENST00000309285 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
XCR1-201ENST00000309285 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
XCR1-201ENST00000309285 KRTAP4-12Q9BQ66 201 aa2.04□□□□□ -2.08
XCR1-201ENST00000309285 MUC5ACP98088 5654 aa2.03□□□□□ -2.09
XCR1-201ENST00000309285 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
XCR1-201ENST00000309285 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
XCR1-201ENST00000309285 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
XCR1-201ENST00000309285 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
XCR1-201ENST00000309285 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
XCR1-201ENST00000309285 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
XCR1-201ENST00000309285 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
XCR1-201ENST00000309285 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
XCR1-201ENST00000309285 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
XCR1-201ENST00000309285 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
XCR1-201ENST00000309285 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
XCR1-201ENST00000309285 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
XCR1-201ENST00000309285 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
XCR1-201ENST00000309285 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
XCR1-201ENST00000309285 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
XCR1-201ENST00000309285 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
XCR1-201ENST00000309285 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 65.6 ms