RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
LEMD3-201ENST00000308330 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
LEMD3-201ENST00000308330 PRM1P04553 51 aa4.99□□□□□ -1.61
LEMD3-201ENST00000308330 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
LEMD3-201ENST00000308330 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
LEMD3-201ENST00000308330 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
LEMD3-201ENST00000308330 MT1EP04732 61 aa4.93□□□□□ -1.62
LEMD3-201ENST00000308330 MT1LQ93083 61 aa4.9□□□□□ -1.62
LEMD3-201ENST00000308330 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
LEMD3-201ENST00000308330 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
LEMD3-201ENST00000308330 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
LEMD3-201ENST00000308330 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
LEMD3-201ENST00000308330 KRTAP2-1Q9BYU5 128 aa4.86□□□□□ -1.63
LEMD3-201ENST00000308330 SYNE2Q8WXH0 6885 aaKnown RBP4.82□□□□□ -1.64
LEMD3-201ENST00000308330 MT3P25713 68 aa4.77□□□□□ -1.65
LEMD3-201ENST00000308330 MT1MQ8N339 61 aa4.77□□□□□ -1.65
LEMD3-201ENST00000308330 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
LEMD3-201ENST00000308330 MT4P47944 62 aa4.69□□□□□ -1.66
LEMD3-201ENST00000308330 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
LEMD3-201ENST00000308330 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
LEMD3-201ENST00000308330 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
LEMD3-201ENST00000308330 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.67
LEMD3-201ENST00000308330 USH2AO75445 5202 aa4.59□□□□□ -1.67
LEMD3-201ENST00000308330 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
LEMD3-201ENST00000308330 KMT2DO14686 5537 aa4.57□□□□□ -1.68
LEMD3-201ENST00000308330 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
LEMD3-201ENST00000308330 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
LEMD3-201ENST00000308330 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
LEMD3-201ENST00000308330 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
LEMD3-201ENST00000308330 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
LEMD3-201ENST00000308330 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
LEMD3-201ENST00000308330 MT1AP04731 61 aa4.34□□□□□ -1.71
LEMD3-201ENST00000308330 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
LEMD3-201ENST00000308330 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
LEMD3-201ENST00000308330 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
LEMD3-201ENST00000308330 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
LEMD3-201ENST00000308330 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
LEMD3-201ENST00000308330 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
LEMD3-201ENST00000308330 LCE1BQ5T7P3 118 aa4.26□□□□□ -1.73
LEMD3-201ENST00000308330 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
LEMD3-201ENST00000308330 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
LEMD3-201ENST00000308330 MUC12Q9UKN1 5478 aa4.2□□□□□ -1.74
LEMD3-201ENST00000308330 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
LEMD3-201ENST00000308330 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
LEMD3-201ENST00000308330 NEBP20929 6669 aa4.11□□□□□ -1.75
LEMD3-201ENST00000308330 KRTAP5-9P26371 169 aa4.03□□□□□ -1.76
LEMD3-201ENST00000308330 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
LEMD3-201ENST00000308330 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
LEMD3-201ENST00000308330 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
LEMD3-201ENST00000308330 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
LEMD3-201ENST00000308330 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
LEMD3-201ENST00000308330 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
LEMD3-201ENST00000308330 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
LEMD3-201ENST00000308330 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
LEMD3-201ENST00000308330 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
LEMD3-201ENST00000308330 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
LEMD3-201ENST00000308330 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
LEMD3-201ENST00000308330 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
LEMD3-201ENST00000308330 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
LEMD3-201ENST00000308330 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
LEMD3-201ENST00000308330 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
LEMD3-201ENST00000308330 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
LEMD3-201ENST00000308330 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
LEMD3-201ENST00000308330 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
LEMD3-201ENST00000308330 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
LEMD3-201ENST00000308330 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
LEMD3-201ENST00000308330 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
LEMD3-201ENST00000308330 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
LEMD3-201ENST00000308330 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
LEMD3-201ENST00000308330 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
LEMD3-201ENST00000308330 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.01
LEMD3-201ENST00000308330 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
LEMD3-201ENST00000308330 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
LEMD3-201ENST00000308330 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
LEMD3-201ENST00000308330 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
LEMD3-201ENST00000308330 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
LEMD3-201ENST00000308330 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms