RNA–Protein interactions for RNA: ENST00000306107.9

ALCAM-201, Transcript of activated leukocyte cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALCAM, Length 4,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-201ENST00000306107 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
ALCAM-201ENST00000306107 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
ALCAM-201ENST00000306107 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
ALCAM-201ENST00000306107 MT1EP04732 61 aa4.67□□□□□ -1.66
ALCAM-201ENST00000306107 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
ALCAM-201ENST00000306107 TNXBP22105 4242 aa4.67□□□□□ -1.66
ALCAM-201ENST00000306107 MT1LQ93083 61 aa4.65□□□□□ -1.66
ALCAM-201ENST00000306107 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.66
ALCAM-201ENST00000306107 MT4P47944 62 aa4.64□□□□□ -1.67
ALCAM-201ENST00000306107 MT1MQ8N339 61 aa4.54□□□□□ -1.68
ALCAM-201ENST00000306107 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
ALCAM-201ENST00000306107 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
ALCAM-201ENST00000306107 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
ALCAM-201ENST00000306107 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.69
ALCAM-201ENST00000306107 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
ALCAM-201ENST00000306107 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.7
ALCAM-201ENST00000306107 KMT2DO14686 5537 aa4.44□□□□□ -1.7
ALCAM-201ENST00000306107 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
ALCAM-201ENST00000306107 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
ALCAM-201ENST00000306107 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
ALCAM-201ENST00000306107 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
ALCAM-201ENST00000306107 MT3P25713 68 aa4.37□□□□□ -1.71
ALCAM-201ENST00000306107 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
ALCAM-201ENST00000306107 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
ALCAM-201ENST00000306107 USH2AO75445 5202 aa4.33□□□□□ -1.72
ALCAM-201ENST00000306107 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
ALCAM-201ENST00000306107 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
ALCAM-201ENST00000306107 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
ALCAM-201ENST00000306107 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
ALCAM-201ENST00000306107 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
ALCAM-201ENST00000306107 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
ALCAM-201ENST00000306107 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
ALCAM-201ENST00000306107 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
ALCAM-201ENST00000306107 MT1AP04731 61 aa4.14□□□□□ -1.75
ALCAM-201ENST00000306107 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
ALCAM-201ENST00000306107 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
ALCAM-201ENST00000306107 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
ALCAM-201ENST00000306107 LCE4AQ5TA78 99 aa4□□□□□ -1.77
ALCAM-201ENST00000306107 NEBP20929 6669 aa3.97□□□□□ -1.77
ALCAM-201ENST00000306107 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
ALCAM-201ENST00000306107 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
ALCAM-201ENST00000306107 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.79
ALCAM-201ENST00000306107 SSPOA2VEC9 5147 aa3.9□□□□□ -1.79
ALCAM-201ENST00000306107 PRM1P04553 51 aa3.83□□□□□ -1.8
ALCAM-201ENST00000306107 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
ALCAM-201ENST00000306107 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
ALCAM-201ENST00000306107 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
ALCAM-201ENST00000306107 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
ALCAM-201ENST00000306107 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
ALCAM-201ENST00000306107 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
ALCAM-201ENST00000306107 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
ALCAM-201ENST00000306107 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
ALCAM-201ENST00000306107 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
ALCAM-201ENST00000306107 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
ALCAM-201ENST00000306107 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
ALCAM-201ENST00000306107 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
ALCAM-201ENST00000306107 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
ALCAM-201ENST00000306107 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
ALCAM-201ENST00000306107 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
ALCAM-201ENST00000306107 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
ALCAM-201ENST00000306107 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
ALCAM-201ENST00000306107 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
ALCAM-201ENST00000306107 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
ALCAM-201ENST00000306107 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
ALCAM-201ENST00000306107 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
ALCAM-201ENST00000306107 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
ALCAM-201ENST00000306107 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
ALCAM-201ENST00000306107 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
ALCAM-201ENST00000306107 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
ALCAM-201ENST00000306107 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
ALCAM-201ENST00000306107 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
ALCAM-201ENST00000306107 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
ALCAM-201ENST00000306107 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
ALCAM-201ENST00000306107 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
ALCAM-201ENST00000306107 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
ALCAM-201ENST00000306107 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
ALCAM-201ENST00000306107 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms