RNA–Protein interactions for RNA: ENST00000305586.11

FXR1-201, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5 BASIC

Gene FXR1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-201ENST00000305586 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
FXR1-201ENST00000305586 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
FXR1-201ENST00000305586 MT1GP13640 62 aa3.75□□□□□ -1.81
FXR1-201ENST00000305586 MT1MQ8N339 61 aa3.75□□□□□ -1.81
FXR1-201ENST00000305586 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
FXR1-201ENST00000305586 KRTAP9-2Q9BYQ4 174 aa3.74□□□□□ -1.81
FXR1-201ENST00000305586 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
FXR1-201ENST00000305586 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
FXR1-201ENST00000305586 KRTAP2-3P0C7H8 128 aa3.69□□□□□ -1.82
FXR1-201ENST00000305586 KRTAP2-4Q9BYR9 128 aa3.69□□□□□ -1.82
FXR1-201ENST00000305586 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
FXR1-201ENST00000305586 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
FXR1-201ENST00000305586 CRCT1Q9UGL9 99 aa3.64□□□□□ -1.83
FXR1-201ENST00000305586 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
FXR1-201ENST00000305586 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.84
FXR1-201ENST00000305586 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
FXR1-201ENST00000305586 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
FXR1-201ENST00000305586 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
FXR1-201ENST00000305586 SPRR2EP22531 72 aa3.45□□□□□ -1.86
FXR1-201ENST00000305586 SPRR2BP35325 72 aa3.45□□□□□ -1.86
FXR1-201ENST00000305586 SPRR2AP35326 72 aa3.45□□□□□ -1.86
FXR1-201ENST00000305586 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
FXR1-201ENST00000305586 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
FXR1-201ENST00000305586 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
FXR1-201ENST00000305586 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
FXR1-201ENST00000305586 MT1AP04731 61 aa3.34□□□□□ -1.88
FXR1-201ENST00000305586 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
FXR1-201ENST00000305586 SPRR2DP22532 72 aa3.31□□□□□ -1.88
FXR1-201ENST00000305586 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
FXR1-201ENST00000305586 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
FXR1-201ENST00000305586 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
FXR1-201ENST00000305586 KRTAP12-4P60329 112 aa3.23□□□□□ -1.89
FXR1-201ENST00000305586 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.9
FXR1-201ENST00000305586 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
FXR1-201ENST00000305586 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
FXR1-201ENST00000305586 NEBP20929 6669 aa3.07□□□□□ -1.92
FXR1-201ENST00000305586 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
FXR1-201ENST00000305586 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
FXR1-201ENST00000305586 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
FXR1-201ENST00000305586 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
FXR1-201ENST00000305586 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
FXR1-201ENST00000305586 MT3P25713 68 aa3.01□□□□□ -1.93
FXR1-201ENST00000305586 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
FXR1-201ENST00000305586 MT4P47944 62 aa2.91□□□□□ -1.94
FXR1-201ENST00000305586 KRTAP9-9Q9BYP9 154 aa2.9□□□□□ -1.94
FXR1-201ENST00000305586 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
FXR1-201ENST00000305586 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
FXR1-201ENST00000305586 PRM1P04553 51 aa2.83□□□□□ -1.96
FXR1-201ENST00000305586 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
FXR1-201ENST00000305586 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
FXR1-201ENST00000305586 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
FXR1-201ENST00000305586 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
FXR1-201ENST00000305586 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
FXR1-201ENST00000305586 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
FXR1-201ENST00000305586 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
FXR1-201ENST00000305586 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
FXR1-201ENST00000305586 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
FXR1-201ENST00000305586 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
FXR1-201ENST00000305586 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.02
FXR1-201ENST00000305586 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
FXR1-201ENST00000305586 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
FXR1-201ENST00000305586 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
FXR1-201ENST00000305586 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
FXR1-201ENST00000305586 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
FXR1-201ENST00000305586 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
FXR1-201ENST00000305586 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
FXR1-201ENST00000305586 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
FXR1-201ENST00000305586 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
FXR1-201ENST00000305586 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.05
FXR1-201ENST00000305586 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
FXR1-201ENST00000305586 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
FXR1-201ENST00000305586 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
FXR1-201ENST00000305586 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
FXR1-201ENST00000305586 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
FXR1-201ENST00000305586 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
FXR1-201ENST00000305586 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
FXR1-201ENST00000305586 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms