RNA–Protein interactions for RNA: ENST00000302118.5

PCSK9-201, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK9, Length 3,637 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-201ENST00000302118 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
PCSK9-201ENST00000302118 MT1GP13640 62 aa4.16□□□□□ -1.74
PCSK9-201ENST00000302118 MT1LQ93083 61 aa4.16□□□□□ -1.74
PCSK9-201ENST00000302118 MT1EP04732 61 aa4.15□□□□□ -1.75
PCSK9-201ENST00000302118 SPRR2FQ96RM1 72 aa4.09□□□□□ -1.75
PCSK9-201ENST00000302118 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
PCSK9-201ENST00000302118 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
PCSK9-201ENST00000302118 MACF1Q9UPN3 7388 aaKnown RBP4.02□□□□□ -1.77
PCSK9-201ENST00000302118 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
PCSK9-201ENST00000302118 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
PCSK9-201ENST00000302118 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
PCSK9-201ENST00000302118 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
PCSK9-201ENST00000302118 LCE2DQ5TA82 110 aaPredicted RBP3.94□□□□□ -1.78
PCSK9-201ENST00000302118 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
PCSK9-201ENST00000302118 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
PCSK9-201ENST00000302118 MT1MQ8N339 61 aa3.91□□□□□ -1.78
PCSK9-201ENST00000302118 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.78
PCSK9-201ENST00000302118 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
PCSK9-201ENST00000302118 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
PCSK9-201ENST00000302118 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
PCSK9-201ENST00000302118 SPRR2EP22531 72 aa3.69□□□□□ -1.82
PCSK9-201ENST00000302118 SPRR2BP35325 72 aa3.69□□□□□ -1.82
PCSK9-201ENST00000302118 SPRR2AP35326 72 aa3.69□□□□□ -1.82
PCSK9-201ENST00000302118 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
PCSK9-201ENST00000302118 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
PCSK9-201ENST00000302118 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
PCSK9-201ENST00000302118 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
PCSK9-201ENST00000302118 PRM1P04553 51 aa3.53□□□□□ -1.84
PCSK9-201ENST00000302118 SPRR2DP22532 72 aa3.51□□□□□ -1.85
PCSK9-201ENST00000302118 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
PCSK9-201ENST00000302118 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.85
PCSK9-201ENST00000302118 KRTAP9-6A0A140TA67 174 aa3.46□□□□□ -1.86
PCSK9-201ENST00000302118 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.45□□□□□ -1.86
PCSK9-201ENST00000302118 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
PCSK9-201ENST00000302118 MT1AP04731 61 aa3.44□□□□□ -1.86
PCSK9-201ENST00000302118 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
PCSK9-201ENST00000302118 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
PCSK9-201ENST00000302118 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
PCSK9-201ENST00000302118 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
PCSK9-201ENST00000302118 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
PCSK9-201ENST00000302118 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
PCSK9-201ENST00000302118 MT4P47944 62 aa3.27□□□□□ -1.89
PCSK9-201ENST00000302118 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
PCSK9-201ENST00000302118 MT3P25713 68 aa3.21□□□□□ -1.9
PCSK9-201ENST00000302118 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
PCSK9-201ENST00000302118 NEBP20929 6669 aa3.14□□□□□ -1.91
PCSK9-201ENST00000302118 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
PCSK9-201ENST00000302118 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
PCSK9-201ENST00000302118 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
PCSK9-201ENST00000302118 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
PCSK9-201ENST00000302118 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
PCSK9-201ENST00000302118 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
PCSK9-201ENST00000302118 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
PCSK9-201ENST00000302118 LCE4AQ5TA78 99 aa2.84□□□□□ -1.95
PCSK9-201ENST00000302118 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
PCSK9-201ENST00000302118 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
PCSK9-201ENST00000302118 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
PCSK9-201ENST00000302118 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
PCSK9-201ENST00000302118 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
PCSK9-201ENST00000302118 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
PCSK9-201ENST00000302118 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
PCSK9-201ENST00000302118 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
PCSK9-201ENST00000302118 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
PCSK9-201ENST00000302118 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
PCSK9-201ENST00000302118 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
PCSK9-201ENST00000302118 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
PCSK9-201ENST00000302118 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
PCSK9-201ENST00000302118 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
PCSK9-201ENST00000302118 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
PCSK9-201ENST00000302118 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
PCSK9-201ENST00000302118 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
PCSK9-201ENST00000302118 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
PCSK9-201ENST00000302118 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
PCSK9-201ENST00000302118 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
PCSK9-201ENST00000302118 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
PCSK9-201ENST00000302118 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
PCSK9-201ENST00000302118 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms