RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 KMT2CQ8NEZ4 4911 aaKnown RBP3.81□□□□□ -1.8
ABCA3-201ENST00000301732 MT1EP04732 61 aa3.79□□□□□ -1.8
ABCA3-201ENST00000301732 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
ABCA3-201ENST00000301732 KRTAP9-2Q9BYQ4 174 aa3.74□□□□□ -1.81
ABCA3-201ENST00000301732 EPPK1P58107 5090 aaKnown RBP3.72□□□□□ -1.81
ABCA3-201ENST00000301732 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.81
ABCA3-201ENST00000301732 MT1MQ8N339 61 aa3.71□□□□□ -1.82
ABCA3-201ENST00000301732 MT3P25713 68 aa3.65□□□□□ -1.82
ABCA3-201ENST00000301732 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
ABCA3-201ENST00000301732 UBR4Q5T4S7 5183 aa3.6□□□□□ -1.83
ABCA3-201ENST00000301732 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
ABCA3-201ENST00000301732 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
ABCA3-201ENST00000301732 MUC2Q02817 5179 aa3.59□□□□□ -1.83
ABCA3-201ENST00000301732 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
ABCA3-201ENST00000301732 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
ABCA3-201ENST00000301732 ABCA13Q86UQ4 5058 aa3.5□□□□□ -1.85
ABCA3-201ENST00000301732 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
ABCA3-201ENST00000301732 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
ABCA3-201ENST00000301732 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
ABCA3-201ENST00000301732 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
ABCA3-201ENST00000301732 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
ABCA3-201ENST00000301732 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
ABCA3-201ENST00000301732 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
ABCA3-201ENST00000301732 FAT4Q6V0I7 4981 aa3.4□□□□□ -1.86
ABCA3-201ENST00000301732 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
ABCA3-201ENST00000301732 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
ABCA3-201ENST00000301732 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
ABCA3-201ENST00000301732 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
ABCA3-201ENST00000301732 LCE2AQ5TA79 106 aaPredicted RBP3.38□□□□□ -1.87
ABCA3-201ENST00000301732 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
ABCA3-201ENST00000301732 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
ABCA3-201ENST00000301732 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
ABCA3-201ENST00000301732 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
ABCA3-201ENST00000301732 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
ABCA3-201ENST00000301732 MT1AP04731 61 aa3.35□□□□□ -1.87
ABCA3-201ENST00000301732 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
ABCA3-201ENST00000301732 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
ABCA3-201ENST00000301732 KMT2DO14686 5537 aa3.27□□□□□ -1.89
ABCA3-201ENST00000301732 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
ABCA3-201ENST00000301732 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
ABCA3-201ENST00000301732 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.17□□□□□ -1.9
ABCA3-201ENST00000301732 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.91
ABCA3-201ENST00000301732 USH2AO75445 5202 aa3.13□□□□□ -1.91
ABCA3-201ENST00000301732 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
ABCA3-201ENST00000301732 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
ABCA3-201ENST00000301732 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
ABCA3-201ENST00000301732 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
ABCA3-201ENST00000301732 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
ABCA3-201ENST00000301732 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
ABCA3-201ENST00000301732 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
ABCA3-201ENST00000301732 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
ABCA3-201ENST00000301732 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
ABCA3-201ENST00000301732 MUC12Q9UKN1 5478 aa2.81□□□□□ -1.96
ABCA3-201ENST00000301732 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
ABCA3-201ENST00000301732 MDN1Q9NU22 5596 aa2.64□□□□□ -1.99
ABCA3-201ENST00000301732 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
ABCA3-201ENST00000301732 NEBP20929 6669 aa2.63□□□□□ -1.99
ABCA3-201ENST00000301732 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
ABCA3-201ENST00000301732 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
ABCA3-201ENST00000301732 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
ABCA3-201ENST00000301732 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
ABCA3-201ENST00000301732 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
ABCA3-201ENST00000301732 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
ABCA3-201ENST00000301732 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
ABCA3-201ENST00000301732 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
ABCA3-201ENST00000301732 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
ABCA3-201ENST00000301732 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
ABCA3-201ENST00000301732 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
ABCA3-201ENST00000301732 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
ABCA3-201ENST00000301732 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
ABCA3-201ENST00000301732 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
ABCA3-201ENST00000301732 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
ABCA3-201ENST00000301732 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
ABCA3-201ENST00000301732 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
ABCA3-201ENST00000301732 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
ABCA3-201ENST00000301732 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
ABCA3-201ENST00000301732 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms