RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 MT1EP04732 61 aa2.31□□□□□ -2.04
RAG1-201ENST00000299440 MT1LQ93083 61 aa2.31□□□□□ -2.04
RAG1-201ENST00000299440 KRTAP19-2Q3LHN2 52 aa2.31□□□□□ -2.04
RAG1-201ENST00000299440 LCE1DQ5T752 114 aa2.3□□□□□ -2.04
RAG1-201ENST00000299440 LCE2AQ5TA79 106 aaPredicted RBP2.3□□□□□ -2.04
RAG1-201ENST00000299440 MT1MQ8N339 61 aa2.27□□□□□ -2.05
RAG1-201ENST00000299440 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.26□□□□□ -2.05
RAG1-201ENST00000299440 MT3P25713 68 aa2.26□□□□□ -2.05
RAG1-201ENST00000299440 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
RAG1-201ENST00000299440 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
RAG1-201ENST00000299440 FAT4Q6V0I7 4981 aa2.25□□□□□ -2.05
RAG1-201ENST00000299440 MUC2Q02817 5179 aa2.24□□□□□ -2.05
RAG1-201ENST00000299440 RNF213Q63HN8 5207 aa2.24□□□□□ -2.05
RAG1-201ENST00000299440 LOC100996750A0A140TA64 210 aa2.24□□□□□ -2.05
RAG1-201ENST00000299440 KRTAP2-3P0C7H8 128 aa2.23□□□□□ -2.05
RAG1-201ENST00000299440 KRTAP2-4Q9BYR9 128 aa2.23□□□□□ -2.05
RAG1-201ENST00000299440 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
RAG1-201ENST00000299440 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
RAG1-201ENST00000299440 KRTAP4-9Q9BYQ8 210 aa2.22□□□□□ -2.05
RAG1-201ENST00000299440 LCE5AQ5TCM9 118 aa2.2□□□□□ -2.06
RAG1-201ENST00000299440 TNXBP22105 4242 aa2.2□□□□□ -2.06
RAG1-201ENST00000299440 FLGP20930 4061 aaPredicted RBP2.17□□□□□ -2.06
RAG1-201ENST00000299440 MUC17Q685J3 4493 aa2.17□□□□□ -2.06
RAG1-201ENST00000299440 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.07
RAG1-201ENST00000299440 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.07
RAG1-201ENST00000299440 HMCN2Q8NDA2 5059 aa2.1□□□□□ -2.07
RAG1-201ENST00000299440 LCE1AQ5T7P2 110 aa2.08□□□□□ -2.08
RAG1-201ENST00000299440 MT1AP04731 61 aa2.07□□□□□ -2.08
RAG1-201ENST00000299440 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
RAG1-201ENST00000299440 LCE4AQ5TA78 99 aa2.06□□□□□ -2.08
RAG1-201ENST00000299440 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
RAG1-201ENST00000299440 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
RAG1-201ENST00000299440 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
RAG1-201ENST00000299440 PRM1P04553 51 aa2.03□□□□□ -2.08
RAG1-201ENST00000299440 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
RAG1-201ENST00000299440 KRTAP6-2Q3LI66 62 aa2.01□□□□□ -2.09
RAG1-201ENST00000299440 MACF1Q9UPN3 7388 aaKnown RBP1.99□□□□□ -2.09
RAG1-201ENST00000299440 KRTAP6-1Q3LI64 71 aa1.96□□□□□ -2.1
RAG1-201ENST00000299440 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
RAG1-201ENST00000299440 NEBP20929 6669 aa1.94□□□□□ -2.1
RAG1-201ENST00000299440 KRTAP4-6Q9BYQ5 205 aa1.94□□□□□ -2.1
RAG1-201ENST00000299440 KRTAP9-4Q9BYQ2 154 aa1.93□□□□□ -2.1
RAG1-201ENST00000299440 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
RAG1-201ENST00000299440 USH2AO75445 5202 aa1.9□□□□□ -2.11
RAG1-201ENST00000299440 KMT2DO14686 5537 aa1.89□□□□□ -2.11
RAG1-201ENST00000299440 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.11
RAG1-201ENST00000299440 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
RAG1-201ENST00000299440 SSPOA2VEC9 5147 aa1.78□□□□□ -2.12
RAG1-201ENST00000299440 KRTAP9-6A8MVA2 160 aa1.77□□□□□ -2.13
RAG1-201ENST00000299440 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
RAG1-201ENST00000299440 KRTAP5-9P26371 169 aa1.75□□□□□ -2.13
RAG1-201ENST00000299440 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
RAG1-201ENST00000299440 KRTAP4-12Q9BQ66 201 aa1.67□□□□□ -2.14
RAG1-201ENST00000299440 KRTAP4-2Q9BYR5 136 aa1.67□□□□□ -2.14
RAG1-201ENST00000299440 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
RAG1-201ENST00000299440 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
RAG1-201ENST00000299440 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
RAG1-201ENST00000299440 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
RAG1-201ENST00000299440 KRTAP5-4Q6L8H1 288 aa1.57□□□□□ -2.16
RAG1-201ENST00000299440 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
RAG1-201ENST00000299440 KRTAP5-3Q6L8H2 238 aa1.49□□□□□ -2.17
RAG1-201ENST00000299440 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.46□□□□□ -2.18
RAG1-201ENST00000299440 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
RAG1-201ENST00000299440 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
RAG1-201ENST00000299440 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
RAG1-201ENST00000299440 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
RAG1-201ENST00000299440 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.19
RAG1-201ENST00000299440 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
RAG1-201ENST00000299440 AHNAKQ09666 5890 aaKnown RBP1.19□□□□□ -2.22
RAG1-201ENST00000299440 MUC5BQ9HC84 5762 aaPredicted RBP1.13□□□□□ -2.23
RAG1-201ENST00000299440 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
RAG1-201ENST00000299440 KRTAP5-11Q6L8G4 156 aa1.02□□□□□ -2.25
RAG1-201ENST00000299440 KRTAP5-1Q6L8H4 278 aa1.01□□□□□ -2.25
RAG1-201ENST00000299440 KRTAP5-7Q6L8G8 165 aa1.01□□□□□ -2.25
RAG1-201ENST00000299440 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
RAG1-201ENST00000299440 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
RAG1-201ENST00000299440 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 74.2 ms