RNA–Protein interactions for RNA: ENST00000297273.8

CASD1-201, Transcript of CAS1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASD1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-201ENST00000297273 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
CASD1-201ENST00000297273 KRTAP19-7Q3SYF9 63 aa6.22□□□□□ -1.41
CASD1-201ENST00000297273 MT1LQ93083 61 aa6.21□□□□□ -1.41
CASD1-201ENST00000297273 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
CASD1-201ENST00000297273 MT1EP04732 61 aa6.17□□□□□ -1.42
CASD1-201ENST00000297273 LCE2AQ5TA79 106 aaPredicted RBP6.15□□□□□ -1.43
CASD1-201ENST00000297273 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
CASD1-201ENST00000297273 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
CASD1-201ENST00000297273 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
CASD1-201ENST00000297273 KRTAP19-3Q7Z4W3 81 aa5.9□□□□□ -1.47
CASD1-201ENST00000297273 MT1MQ8N339 61 aa5.86□□□□□ -1.47
CASD1-201ENST00000297273 MACF1Q9UPN3 7388 aaKnown RBP5.78□□□□□ -1.48
CASD1-201ENST00000297273 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
CASD1-201ENST00000297273 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
CASD1-201ENST00000297273 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
CASD1-201ENST00000297273 KRTAP19-6Q3LI70 58 aa5.75□□□□□ -1.49
CASD1-201ENST00000297273 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
CASD1-201ENST00000297273 SPRR2EP22531 72 aa5.69□□□□□ -1.5
CASD1-201ENST00000297273 SPRR2BP35325 72 aa5.69□□□□□ -1.5
CASD1-201ENST00000297273 SPRR2AP35326 72 aa5.69□□□□□ -1.5
CASD1-201ENST00000297273 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
CASD1-201ENST00000297273 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
CASD1-201ENST00000297273 MDN1Q9NU22 5596 aa5.56□□□□□ -1.52
CASD1-201ENST00000297273 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
CASD1-201ENST00000297273 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
CASD1-201ENST00000297273 SPRR2DP22532 72 aa5.4□□□□□ -1.54
CASD1-201ENST00000297273 PRM1P04553 51 aa5.38□□□□□ -1.55
CASD1-201ENST00000297273 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
CASD1-201ENST00000297273 KRTAP9-2Q9BYQ4 174 aa5.34□□□□□ -1.56
CASD1-201ENST00000297273 KRTAP9-7A8MTY7 169 aa5.26□□□□□ -1.57
CASD1-201ENST00000297273 MT1AP04731 61 aa5.18□□□□□ -1.58
CASD1-201ENST00000297273 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
CASD1-201ENST00000297273 MT4P47944 62 aa5.12□□□□□ -1.59
CASD1-201ENST00000297273 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
CASD1-201ENST00000297273 MT3P25713 68 aa4.99□□□□□ -1.61
CASD1-201ENST00000297273 MUC19Q7Z5P9 8384 aa4.85□□□□□ -1.63
CASD1-201ENST00000297273 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.64
CASD1-201ENST00000297273 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
CASD1-201ENST00000297273 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
CASD1-201ENST00000297273 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
CASD1-201ENST00000297273 KRTAP5-5Q701N2 237 aaPredicted RBP4.65□□□□□ -1.66
CASD1-201ENST00000297273 KRTAP5-9P26371 169 aa4.57□□□□□ -1.68
CASD1-201ENST00000297273 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
CASD1-201ENST00000297273 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
CASD1-201ENST00000297273 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
CASD1-201ENST00000297273 NEBP20929 6669 aa4.42□□□□□ -1.7
CASD1-201ENST00000297273 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
CASD1-201ENST00000297273 MUC5ACP98088 5654 aa4.35□□□□□ -1.71
CASD1-201ENST00000297273 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
CASD1-201ENST00000297273 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
CASD1-201ENST00000297273 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.75
CASD1-201ENST00000297273 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
CASD1-201ENST00000297273 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
CASD1-201ENST00000297273 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
CASD1-201ENST00000297273 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.78
CASD1-201ENST00000297273 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
CASD1-201ENST00000297273 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
CASD1-201ENST00000297273 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
CASD1-201ENST00000297273 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
CASD1-201ENST00000297273 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
CASD1-201ENST00000297273 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
CASD1-201ENST00000297273 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
CASD1-201ENST00000297273 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
CASD1-201ENST00000297273 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
CASD1-201ENST00000297273 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
CASD1-201ENST00000297273 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
CASD1-201ENST00000297273 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
CASD1-201ENST00000297273 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
CASD1-201ENST00000297273 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CASD1-201ENST00000297273 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
CASD1-201ENST00000297273 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
CASD1-201ENST00000297273 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
CASD1-201ENST00000297273 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
CASD1-201ENST00000297273 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
CASD1-201ENST00000297273 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
CASD1-201ENST00000297273 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
CASD1-201ENST00000297273 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 61.3 ms