RNA–Protein interactions for RNA: ENST00000291503.9

ATP13A1-201, Transcript of ATPase 13A1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP13A1, Length 3,483 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-201ENST00000291503 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
ATP13A1-201ENST00000291503 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
ATP13A1-201ENST00000291503 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
ATP13A1-201ENST00000291503 MT1GP13640 62 aa3.67□□□□□ -1.82
ATP13A1-201ENST00000291503 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
ATP13A1-201ENST00000291503 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.83
ATP13A1-201ENST00000291503 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.83
ATP13A1-201ENST00000291503 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.83
ATP13A1-201ENST00000291503 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
ATP13A1-201ENST00000291503 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
ATP13A1-201ENST00000291503 KRTAP19-3Q7Z4W3 81 aa3.57□□□□□ -1.84
ATP13A1-201ENST00000291503 LCE2DQ5TA82 110 aaPredicted RBP3.56□□□□□ -1.84
ATP13A1-201ENST00000291503 MT1MQ8N339 61 aa3.54□□□□□ -1.84
ATP13A1-201ENST00000291503 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
ATP13A1-201ENST00000291503 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
ATP13A1-201ENST00000291503 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
ATP13A1-201ENST00000291503 LCE3BQ5TA77 95 aa3.44□□□□□ -1.86
ATP13A1-201ENST00000291503 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
ATP13A1-201ENST00000291503 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
ATP13A1-201ENST00000291503 KRTAP9-2Q9BYQ4 174 aa3.34□□□□□ -1.88
ATP13A1-201ENST00000291503 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
ATP13A1-201ENST00000291503 SPRR2EP22531 72 aa3.31□□□□□ -1.88
ATP13A1-201ENST00000291503 SPRR2BP35325 72 aa3.31□□□□□ -1.88
ATP13A1-201ENST00000291503 SPRR2AP35326 72 aa3.31□□□□□ -1.88
ATP13A1-201ENST00000291503 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
ATP13A1-201ENST00000291503 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
ATP13A1-201ENST00000291503 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
ATP13A1-201ENST00000291503 SPRR2DP22532 72 aa3.15□□□□□ -1.9
ATP13A1-201ENST00000291503 MT1AP04731 61 aa3.14□□□□□ -1.91
ATP13A1-201ENST00000291503 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
ATP13A1-201ENST00000291503 PRM1P04553 51 aa3.12□□□□□ -1.91
ATP13A1-201ENST00000291503 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
ATP13A1-201ENST00000291503 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
ATP13A1-201ENST00000291503 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
ATP13A1-201ENST00000291503 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
ATP13A1-201ENST00000291503 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
ATP13A1-201ENST00000291503 KRTAP9-6A0A140TA67 174 aa3.02□□□□□ -1.93
ATP13A1-201ENST00000291503 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
ATP13A1-201ENST00000291503 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
ATP13A1-201ENST00000291503 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.93
ATP13A1-201ENST00000291503 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
ATP13A1-201ENST00000291503 MT3P25713 68 aa2.92□□□□□ -1.94
ATP13A1-201ENST00000291503 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
ATP13A1-201ENST00000291503 MT4P47944 62 aa2.88□□□□□ -1.95
ATP13A1-201ENST00000291503 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
ATP13A1-201ENST00000291503 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
ATP13A1-201ENST00000291503 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
ATP13A1-201ENST00000291503 NEBP20929 6669 aa2.68□□□□□ -1.98
ATP13A1-201ENST00000291503 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
ATP13A1-201ENST00000291503 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
ATP13A1-201ENST00000291503 LCE4AQ5TA78 99 aa2.57□□□□□ -2
ATP13A1-201ENST00000291503 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
ATP13A1-201ENST00000291503 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
ATP13A1-201ENST00000291503 KRTAP20-1Q3LI63 56 aa2.44□□□□□ -2.02
ATP13A1-201ENST00000291503 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.02
ATP13A1-201ENST00000291503 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
ATP13A1-201ENST00000291503 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
ATP13A1-201ENST00000291503 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
ATP13A1-201ENST00000291503 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
ATP13A1-201ENST00000291503 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
ATP13A1-201ENST00000291503 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.06
ATP13A1-201ENST00000291503 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
ATP13A1-201ENST00000291503 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
ATP13A1-201ENST00000291503 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
ATP13A1-201ENST00000291503 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
ATP13A1-201ENST00000291503 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
ATP13A1-201ENST00000291503 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
ATP13A1-201ENST00000291503 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
ATP13A1-201ENST00000291503 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
ATP13A1-201ENST00000291503 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
ATP13A1-201ENST00000291503 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
ATP13A1-201ENST00000291503 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
ATP13A1-201ENST00000291503 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
ATP13A1-201ENST00000291503 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
ATP13A1-201ENST00000291503 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
ATP13A1-201ENST00000291503 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
ATP13A1-201ENST00000291503 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms