RNA–Protein interactions for RNA: ENST00000290858.10

CBFB-201, Transcript of core-binding factor subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBFB, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-201ENST00000290858 CRCT1Q9UGL9 99 aa5.63□□□□□ -1.51
CBFB-201ENST00000290858 MT1EP04732 61 aa5.62□□□□□ -1.51
CBFB-201ENST00000290858 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
CBFB-201ENST00000290858 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.52
CBFB-201ENST00000290858 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
CBFB-201ENST00000290858 MT1GP13640 62 aa5.45□□□□□ -1.54
CBFB-201ENST00000290858 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
CBFB-201ENST00000290858 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
CBFB-201ENST00000290858 KRTAP2-1Q9BYU5 128 aa5.44□□□□□ -1.54
CBFB-201ENST00000290858 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
CBFB-201ENST00000290858 KRTAP19-6Q3LI70 58 aa5.42□□□□□ -1.54
CBFB-201ENST00000290858 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
CBFB-201ENST00000290858 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
CBFB-201ENST00000290858 MT1MQ8N339 61 aa5.27□□□□□ -1.57
CBFB-201ENST00000290858 KRTAP19-3Q7Z4W3 81 aa5.23□□□□□ -1.57
CBFB-201ENST00000290858 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
CBFB-201ENST00000290858 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
CBFB-201ENST00000290858 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
CBFB-201ENST00000290858 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.59
CBFB-201ENST00000290858 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
CBFB-201ENST00000290858 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
CBFB-201ENST00000290858 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
CBFB-201ENST00000290858 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
CBFB-201ENST00000290858 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
CBFB-201ENST00000290858 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
CBFB-201ENST00000290858 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
CBFB-201ENST00000290858 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
CBFB-201ENST00000290858 SPRR2EP22531 72 aa4.68□□□□□ -1.66
CBFB-201ENST00000290858 SPRR2BP35325 72 aa4.68□□□□□ -1.66
CBFB-201ENST00000290858 SPRR2AP35326 72 aa4.68□□□□□ -1.66
CBFB-201ENST00000290858 MT1AP04731 61 aa4.63□□□□□ -1.67
CBFB-201ENST00000290858 PRM1P04553 51 aa4.63□□□□□ -1.67
CBFB-201ENST00000290858 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
CBFB-201ENST00000290858 KRTAP5-9P26371 169 aa4.55□□□□□ -1.68
CBFB-201ENST00000290858 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
CBFB-201ENST00000290858 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
CBFB-201ENST00000290858 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
CBFB-201ENST00000290858 SPRR2DP22532 72 aa4.45□□□□□ -1.7
CBFB-201ENST00000290858 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
CBFB-201ENST00000290858 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
CBFB-201ENST00000290858 NEBP20929 6669 aa4.35□□□□□ -1.71
CBFB-201ENST00000290858 MT3P25713 68 aa4.18□□□□□ -1.74
CBFB-201ENST00000290858 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.74
CBFB-201ENST00000290858 MT4P47944 62 aa4.13□□□□□ -1.75
CBFB-201ENST00000290858 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
CBFB-201ENST00000290858 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
CBFB-201ENST00000290858 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
CBFB-201ENST00000290858 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
CBFB-201ENST00000290858 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
CBFB-201ENST00000290858 LCE1DQ5T752 114 aa3.9□□□□□ -1.78
CBFB-201ENST00000290858 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
CBFB-201ENST00000290858 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
CBFB-201ENST00000290858 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
CBFB-201ENST00000290858 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CBFB-201ENST00000290858 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
CBFB-201ENST00000290858 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
CBFB-201ENST00000290858 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
CBFB-201ENST00000290858 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
CBFB-201ENST00000290858 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
CBFB-201ENST00000290858 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
CBFB-201ENST00000290858 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.88
CBFB-201ENST00000290858 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.88
CBFB-201ENST00000290858 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
CBFB-201ENST00000290858 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
CBFB-201ENST00000290858 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
CBFB-201ENST00000290858 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
CBFB-201ENST00000290858 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
CBFB-201ENST00000290858 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
CBFB-201ENST00000290858 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
CBFB-201ENST00000290858 KRTAP5-8O75690 187 aa3□□□□□ -1.93
CBFB-201ENST00000290858 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
CBFB-201ENST00000290858 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
CBFB-201ENST00000290858 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
CBFB-201ENST00000290858 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
CBFB-201ENST00000290858 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
CBFB-201ENST00000290858 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
CBFB-201ENST00000290858 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 108.1 ms