RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 KRTAP9-6A0A140TA67 174 aa1.57□□□□□ -2.16
NCOA1-201ENST00000288599 KMT2DO14686 5537 aa1.56□□□□□ -2.16
NCOA1-201ENST00000288599 MT1GP13640 62 aa1.53□□□□□ -2.16
NCOA1-201ENST00000288599 MT2AP02795 61 aa1.53□□□□□ -2.16
NCOA1-201ENST00000288599 KRTAP9-7A8MTY7 169 aa1.52□□□□□ -2.17
NCOA1-201ENST00000288599 KRTAP9-8Q9BYQ0 159 aa1.52□□□□□ -2.17
NCOA1-201ENST00000288599 LCE2AQ5TA79 106 aaPredicted RBP1.5□□□□□ -2.17
NCOA1-201ENST00000288599 MT1BP07438 61 aa1.48□□□□□ -2.17
NCOA1-201ENST00000288599 KRTAP9-2Q9BYQ4 174 aa1.48□□□□□ -2.17
NCOA1-201ENST00000288599 MT1FP04733 61 aa1.48□□□□□ -2.17
NCOA1-201ENST00000288599 KRTAP19-8Q3LI54 63 aa1.48□□□□□ -2.17
NCOA1-201ENST00000288599 KRTAP2-3P0C7H8 128 aa1.47□□□□□ -2.17
NCOA1-201ENST00000288599 KRTAP2-4Q9BYR9 128 aa1.47□□□□□ -2.17
NCOA1-201ENST00000288599 OBSCNQ5VST9 7968 aa1.46□□□□□ -2.18
NCOA1-201ENST00000288599 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
NCOA1-201ENST00000288599 MUC12Q9UKN1 5478 aa1.45□□□□□ -2.18
NCOA1-201ENST00000288599 MT1XP80297 61 aa1.45□□□□□ -2.18
NCOA1-201ENST00000288599 KRTAP9-9Q9BYP9 154 aa1.44□□□□□ -2.18
NCOA1-201ENST00000288599 KRTAP9-3Q9BYQ3 159 aa1.44□□□□□ -2.18
NCOA1-201ENST00000288599 SYNE1Q8NF91 8797 aaKnown RBP1.44□□□□□ -2.18
NCOA1-201ENST00000288599 PRM1P04553 51 aa1.43□□□□□ -2.18
NCOA1-201ENST00000288599 KRTAP19-3Q7Z4W3 81 aa1.43□□□□□ -2.18
NCOA1-201ENST00000288599 KRTAP19-6Q3LI70 58 aa1.42□□□□□ -2.18
NCOA1-201ENST00000288599 FSIP2Q5CZC0 6907 aa1.41□□□□□ -2.18
NCOA1-201ENST00000288599 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.19
NCOA1-201ENST00000288599 KRTAP4-8A0A0G2JLE6 195 aa1.4□□□□□ -2.19
NCOA1-201ENST00000288599 KRTAP4-8Q9BYQ9 185 aa1.4□□□□□ -2.19
NCOA1-201ENST00000288599 KRTAP9-6A8MVA2 160 aa1.39□□□□□ -2.19
NCOA1-201ENST00000288599 LCE4AQ5TA78 99 aa1.39□□□□□ -2.19
NCOA1-201ENST00000288599 KRTAP4-7Q9BYR0 210 aa1.39□□□□□ -2.19
NCOA1-201ENST00000288599 KRTAP2-2Q9BYT5 123 aa1.37□□□□□ -2.19
NCOA1-201ENST00000288599 KRTAP2-1Q9BYU5 128 aa1.37□□□□□ -2.19
NCOA1-201ENST00000288599 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
NCOA1-201ENST00000288599 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
NCOA1-201ENST00000288599 LOC100996750A0A140TA64 210 aa1.33□□□□□ -2.2
NCOA1-201ENST00000288599 SYNE2Q8WXH0 6885 aaKnown RBP1.31□□□□□ -2.2
NCOA1-201ENST00000288599 KRTAP4-9Q9BYQ8 210 aa1.31□□□□□ -2.2
NCOA1-201ENST00000288599 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
NCOA1-201ENST00000288599 MT1LQ93083 61 aa1.29□□□□□ -2.2
NCOA1-201ENST00000288599 KRTAP4-3Q9BYR4 195 aa1.28□□□□□ -2.2
NCOA1-201ENST00000288599 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.27□□□□□ -2.21
NCOA1-201ENST00000288599 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
NCOA1-201ENST00000288599 MACF1Q9UPN3 7388 aaKnown RBP1.24□□□□□ -2.21
NCOA1-201ENST00000288599 MT1MQ8N339 61 aa1.23□□□□□ -2.21
NCOA1-201ENST00000288599 MT1EP04732 61 aa1.23□□□□□ -2.21
NCOA1-201ENST00000288599 MT1AP04731 61 aa1.19□□□□□ -2.22
NCOA1-201ENST00000288599 KRTAP4-2Q9BYR5 136 aa1.19□□□□□ -2.22
NCOA1-201ENST00000288599 KRTAP6-2Q3LI66 62 aa1.18□□□□□ -2.22
NCOA1-201ENST00000288599 GPR98Q8WXG9 6306 aa1.18□□□□□ -2.22
NCOA1-201ENST00000288599 KRTAP9-4Q9BYQ2 154 aa1.17□□□□□ -2.22
NCOA1-201ENST00000288599 KRTAP5-2Q701N4 177 aa1.17□□□□□ -2.22
NCOA1-201ENST00000288599 HMCN1Q96RW7 5635 aa1.16□□□□□ -2.22
NCOA1-201ENST00000288599 KRTAP5-5Q701N2 237 aaPredicted RBP1.13□□□□□ -2.23
NCOA1-201ENST00000288599 KRTAP4-6Q9BYQ5 205 aa1.13□□□□□ -2.23
NCOA1-201ENST00000288599 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
NCOA1-201ENST00000288599 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.23
NCOA1-201ENST00000288599 KRTAP4-11Q9BYQ6 195 aa1.08□□□□□ -2.24
NCOA1-201ENST00000288599 KRTAP5-9P26371 169 aa1.08□□□□□ -2.24
NCOA1-201ENST00000288599 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
NCOA1-201ENST00000288599 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.07□□□□□ -2.24
NCOA1-201ENST00000288599 NEBP20929 6669 aa1.07□□□□□ -2.24
NCOA1-201ENST00000288599 KRTAP4-4Q9BYR3 166 aa1.02□□□□□ -2.25
NCOA1-201ENST00000288599 KRTAP4-12Q9BQ66 201 aa1.02□□□□□ -2.25
NCOA1-201ENST00000288599 MUC19Q7Z5P9 8384 aa1.02□□□□□ -2.25
NCOA1-201ENST00000288599 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
NCOA1-201ENST00000288599 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
NCOA1-201ENST00000288599 KRTAP5-4Q6L8H1 288 aa0.98□□□□□ -2.25
NCOA1-201ENST00000288599 MUC5ACP98088 5654 aa0.97□□□□□ -2.25
NCOA1-201ENST00000288599 KRTAP5-3Q6L8H2 238 aa0.88□□□□□ -2.27
NCOA1-201ENST00000288599 KRTAP5-1Q6L8H4 278 aa0.84□□□□□ -2.27
NCOA1-201ENST00000288599 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
NCOA1-201ENST00000288599 KRTAP5-8O75690 187 aa0.82□□□□□ -2.28
NCOA1-201ENST00000288599 KRTAP5-7Q6L8G8 165 aa0.75□□□□□ -2.29
NCOA1-201ENST00000288599 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
NCOA1-201ENST00000288599 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
NCOA1-201ENST00000288599 KRTAP5-11Q6L8G4 156 aa0.65□□□□□ -2.31
NCOA1-201ENST00000288599 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms