RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 KRTAP2-1Q9BYU5 128 aa2.62□□□□□ -1.99
SMC2-201ENST00000286398 PCLOQ9Y6V0 5065 aa2.61□□□□□ -1.99
SMC2-201ENST00000286398 HYDINQ4G0P3 5121 aa2.61□□□□□ -1.99
SMC2-201ENST00000286398 KMT2CQ8NEZ4 4911 aaKnown RBP2.6□□□□□ -1.99
SMC2-201ENST00000286398 PKHD1L1Q86WI1 4243 aa2.6□□□□□ -1.99
SMC2-201ENST00000286398 HSPG2P98160 4391 aa2.59□□□□□ -2
SMC2-201ENST00000286398 MT1AP04731 61 aa2.58□□□□□ -2
SMC2-201ENST00000286398 KRTAP19-2Q3LHN2 52 aa2.57□□□□□ -2
SMC2-201ENST00000286398 KRTAP19-7Q3SYF9 63 aa2.55□□□□□ -2
SMC2-201ENST00000286398 MUC17Q685J3 4493 aa2.54□□□□□ -2
SMC2-201ENST00000286398 LCE5AQ5TCM9 118 aa2.53□□□□□ -2
SMC2-201ENST00000286398 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
SMC2-201ENST00000286398 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
SMC2-201ENST00000286398 UBR4Q5T4S7 5183 aa2.47□□□□□ -2.01
SMC2-201ENST00000286398 TNXBP22105 4242 aa2.46□□□□□ -2.02
SMC2-201ENST00000286398 KRTAP9-7A8MTY7 169 aa2.45□□□□□ -2.02
SMC2-201ENST00000286398 FLGP20930 4061 aaPredicted RBP2.44□□□□□ -2.02
SMC2-201ENST00000286398 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
SMC2-201ENST00000286398 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
SMC2-201ENST00000286398 BIRC6Q9NR09 4857 aa2.42□□□□□ -2.02
SMC2-201ENST00000286398 MUC2Q02817 5179 aa2.41□□□□□ -2.02
SMC2-201ENST00000286398 ABCA13Q86UQ4 5058 aa2.4□□□□□ -2.02
SMC2-201ENST00000286398 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
SMC2-201ENST00000286398 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
SMC2-201ENST00000286398 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
SMC2-201ENST00000286398 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
SMC2-201ENST00000286398 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
SMC2-201ENST00000286398 LCE1AQ5T7P2 110 aa2.38□□□□□ -2.03
SMC2-201ENST00000286398 FSIP2Q5CZC0 6907 aa2.38□□□□□ -2.03
SMC2-201ENST00000286398 SYNE2Q8WXH0 6885 aaKnown RBP2.34□□□□□ -2.03
SMC2-201ENST00000286398 KRTAP2-2Q9BYT5 123 aa2.33□□□□□ -2.04
SMC2-201ENST00000286398 KRTAP9-4Q9BYQ2 154 aa2.33□□□□□ -2.04
SMC2-201ENST00000286398 KRTAP9-2Q9BYQ4 174 aa2.32□□□□□ -2.04
SMC2-201ENST00000286398 HMCN2Q8NDA2 5059 aa2.32□□□□□ -2.04
SMC2-201ENST00000286398 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
SMC2-201ENST00000286398 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
SMC2-201ENST00000286398 DSTQ03001 7570 aaKnown RBP2.26□□□□□ -2.05
SMC2-201ENST00000286398 FAT4Q6V0I7 4981 aa2.24□□□□□ -2.05
SMC2-201ENST00000286398 MACF1Q9UPN3 7388 aaKnown RBP2.23□□□□□ -2.05
SMC2-201ENST00000286398 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
SMC2-201ENST00000286398 USH2AO75445 5202 aa2.19□□□□□ -2.06
SMC2-201ENST00000286398 KRTAP20-1Q3LI63 56 aa2.16□□□□□ -2.06
SMC2-201ENST00000286398 KRTAP4-6Q9BYQ5 205 aa2.15□□□□□ -2.07
SMC2-201ENST00000286398 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
SMC2-201ENST00000286398 KRTAP9-6A0A140TA67 174 aa2.11□□□□□ -2.07
SMC2-201ENST00000286398 KRTAP6-3Q3LI67 103 aa2.1□□□□□ -2.07
SMC2-201ENST00000286398 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
SMC2-201ENST00000286398 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
SMC2-201ENST00000286398 KMT2DO14686 5537 aa1.98□□□□□ -2.09
SMC2-201ENST00000286398 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
SMC2-201ENST00000286398 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.95□□□□□ -2.1
SMC2-201ENST00000286398 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
SMC2-201ENST00000286398 MDN1Q9NU22 5596 aa1.92□□□□□ -2.1
SMC2-201ENST00000286398 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
SMC2-201ENST00000286398 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
SMC2-201ENST00000286398 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
SMC2-201ENST00000286398 KRTAP4-2Q9BYR5 136 aa1.79□□□□□ -2.12
SMC2-201ENST00000286398 NEBP20929 6669 aa1.76□□□□□ -2.13
SMC2-201ENST00000286398 KRTAP5-9P26371 169 aa1.72□□□□□ -2.13
SMC2-201ENST00000286398 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
SMC2-201ENST00000286398 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
SMC2-201ENST00000286398 KRTAP5-4Q6L8H1 288 aa1.58□□□□□ -2.16
SMC2-201ENST00000286398 KRTAP5-3Q6L8H2 238 aa1.5□□□□□ -2.17
SMC2-201ENST00000286398 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
SMC2-201ENST00000286398 KRTAP5-10Q6L8G5 202 aa1.43□□□□□ -2.18
SMC2-201ENST00000286398 KRTAP5-2Q701N4 177 aa1.39□□□□□ -2.19
SMC2-201ENST00000286398 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
SMC2-201ENST00000286398 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.25□□□□□ -2.21
SMC2-201ENST00000286398 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
SMC2-201ENST00000286398 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
SMC2-201ENST00000286398 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
SMC2-201ENST00000286398 KRTAP5-1Q6L8H4 278 aa1.22□□□□□ -2.21
SMC2-201ENST00000286398 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
SMC2-201ENST00000286398 KRTAP5-11Q6L8G4 156 aa1.2□□□□□ -2.22
SMC2-201ENST00000286398 KRTAP21-2Q3LI59 83 aa1.13□□□□□ -2.23
SMC2-201ENST00000286398 KRTAP5-7Q6L8G8 165 aa0.87□□□□□ -2.27
SMC2-201ENST00000286398 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 30.6 ms