RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
CSF1R-201ENST00000286301 KRTAP9-2Q9BYQ4 174 aa3.19□□□□□ -1.9
CSF1R-201ENST00000286301 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
CSF1R-201ENST00000286301 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
CSF1R-201ENST00000286301 MT1GP13640 62 aa3.18□□□□□ -1.9
CSF1R-201ENST00000286301 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
CSF1R-201ENST00000286301 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
CSF1R-201ENST00000286301 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
CSF1R-201ENST00000286301 LCE2DQ5TA82 110 aaPredicted RBP3.14□□□□□ -1.91
CSF1R-201ENST00000286301 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
CSF1R-201ENST00000286301 KRTAP19-3Q7Z4W3 81 aa3.11□□□□□ -1.91
CSF1R-201ENST00000286301 MT1MQ8N339 61 aa3.06□□□□□ -1.92
CSF1R-201ENST00000286301 SPRR2EP22531 72 aa3.05□□□□□ -1.92
CSF1R-201ENST00000286301 SPRR2BP35325 72 aa3.05□□□□□ -1.92
CSF1R-201ENST00000286301 SPRR2AP35326 72 aa3.05□□□□□ -1.92
CSF1R-201ENST00000286301 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
CSF1R-201ENST00000286301 KRTAP19-4Q3LI73 84 aa3.02□□□□□ -1.93
CSF1R-201ENST00000286301 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
CSF1R-201ENST00000286301 KRTAP2-3P0C7H8 128 aa2.98□□□□□ -1.93
CSF1R-201ENST00000286301 KRTAP2-4Q9BYR9 128 aa2.98□□□□□ -1.93
CSF1R-201ENST00000286301 KRTAP2-1Q9BYU5 128 aa2.98□□□□□ -1.93
CSF1R-201ENST00000286301 LCE3BQ5TA77 95 aa2.98□□□□□ -1.93
CSF1R-201ENST00000286301 SPRR2DP22532 72 aa2.92□□□□□ -1.94
CSF1R-201ENST00000286301 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
CSF1R-201ENST00000286301 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
CSF1R-201ENST00000286301 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
CSF1R-201ENST00000286301 KRTAP9-6A0A140TA67 174 aa2.85□□□□□ -1.95
CSF1R-201ENST00000286301 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
CSF1R-201ENST00000286301 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
CSF1R-201ENST00000286301 PRM1P04553 51 aa2.74□□□□□ -1.97
CSF1R-201ENST00000286301 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
CSF1R-201ENST00000286301 KRTAP9-7A8MTY7 169 aa2.72□□□□□ -1.97
CSF1R-201ENST00000286301 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
CSF1R-201ENST00000286301 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
CSF1R-201ENST00000286301 MT1AP04731 61 aa2.7□□□□□ -1.98
CSF1R-201ENST00000286301 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
CSF1R-201ENST00000286301 MT4P47944 62 aa2.67□□□□□ -1.98
CSF1R-201ENST00000286301 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
CSF1R-201ENST00000286301 MT3P25713 68 aa2.55□□□□□ -2
CSF1R-201ENST00000286301 KRTAP9-4Q9BYQ2 154 aa2.54□□□□□ -2
CSF1R-201ENST00000286301 NEBP20929 6669 aa2.52□□□□□ -2.01
CSF1R-201ENST00000286301 KRTAP2-2Q9BYT5 123 aa2.5□□□□□ -2.01
CSF1R-201ENST00000286301 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
CSF1R-201ENST00000286301 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
CSF1R-201ENST00000286301 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
CSF1R-201ENST00000286301 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CSF1R-201ENST00000286301 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.02
CSF1R-201ENST00000286301 LCE1DQ5T752 114 aa2.38□□□□□ -2.03
CSF1R-201ENST00000286301 LCE4AQ5TA78 99 aa2.35□□□□□ -2.03
CSF1R-201ENST00000286301 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
CSF1R-201ENST00000286301 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
CSF1R-201ENST00000286301 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
CSF1R-201ENST00000286301 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
CSF1R-201ENST00000286301 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
CSF1R-201ENST00000286301 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
CSF1R-201ENST00000286301 KRTAP4-11Q9BYQ6 195 aa2.11□□□□□ -2.07
CSF1R-201ENST00000286301 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
CSF1R-201ENST00000286301 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
CSF1R-201ENST00000286301 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
CSF1R-201ENST00000286301 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
CSF1R-201ENST00000286301 KRTAP9-9Q9BYP9 154 aa1.86□□□□□ -2.11
CSF1R-201ENST00000286301 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
CSF1R-201ENST00000286301 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
CSF1R-201ENST00000286301 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.11
CSF1R-201ENST00000286301 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.11
CSF1R-201ENST00000286301 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
CSF1R-201ENST00000286301 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
CSF1R-201ENST00000286301 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
CSF1R-201ENST00000286301 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
CSF1R-201ENST00000286301 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
CSF1R-201ENST00000286301 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.57□□□□□ -2.16
CSF1R-201ENST00000286301 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
CSF1R-201ENST00000286301 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
CSF1R-201ENST00000286301 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.17
CSF1R-201ENST00000286301 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
CSF1R-201ENST00000286301 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
CSF1R-201ENST00000286301 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 104.4 ms