RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
SEC24D-201ENST00000280551 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
SEC24D-201ENST00000280551 MT1LQ93083 61 aa3.63□□□□□ -1.83
SEC24D-201ENST00000280551 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
SEC24D-201ENST00000280551 CRCT1Q9UGL9 99 aa3.55□□□□□ -1.84
SEC24D-201ENST00000280551 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
SEC24D-201ENST00000280551 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
SEC24D-201ENST00000280551 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
SEC24D-201ENST00000280551 LCE5AQ5TCM9 118 aa3.48□□□□□ -1.85
SEC24D-201ENST00000280551 MT1GP13640 62 aa3.47□□□□□ -1.85
SEC24D-201ENST00000280551 MT1MQ8N339 61 aa3.44□□□□□ -1.86
SEC24D-201ENST00000280551 MACF1Q9UPN3 7388 aaKnown RBP3.42□□□□□ -1.86
SEC24D-201ENST00000280551 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
SEC24D-201ENST00000280551 KRTAP2-3P0C7H8 128 aa3.36□□□□□ -1.87
SEC24D-201ENST00000280551 KRTAP2-4Q9BYR9 128 aa3.36□□□□□ -1.87
SEC24D-201ENST00000280551 KRTAP2-1Q9BYU5 128 aa3.36□□□□□ -1.87
SEC24D-201ENST00000280551 LCE1AQ5T7P2 110 aa3.34□□□□□ -1.87
SEC24D-201ENST00000280551 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
SEC24D-201ENST00000280551 SPRR2FQ96RM1 72 aa3.33□□□□□ -1.88
SEC24D-201ENST00000280551 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
SEC24D-201ENST00000280551 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
SEC24D-201ENST00000280551 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
SEC24D-201ENST00000280551 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
SEC24D-201ENST00000280551 KRTAP9-6A0A140TA67 174 aa3.28□□□□□ -1.88
SEC24D-201ENST00000280551 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
SEC24D-201ENST00000280551 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
SEC24D-201ENST00000280551 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
SEC24D-201ENST00000280551 SPRR2EP22531 72 aa3.15□□□□□ -1.91
SEC24D-201ENST00000280551 SPRR2BP35325 72 aa3.15□□□□□ -1.91
SEC24D-201ENST00000280551 SPRR2AP35326 72 aa3.15□□□□□ -1.91
SEC24D-201ENST00000280551 MT1AP04731 61 aa3.09□□□□□ -1.91
SEC24D-201ENST00000280551 NEBP20929 6669 aa3.06□□□□□ -1.92
SEC24D-201ENST00000280551 SPRR2DP22532 72 aa3.04□□□□□ -1.92
SEC24D-201ENST00000280551 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
SEC24D-201ENST00000280551 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
SEC24D-201ENST00000280551 KRTAP4-9Q9BYQ8 210 aa3□□□□□ -1.93
SEC24D-201ENST00000280551 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
SEC24D-201ENST00000280551 PRM1P04553 51 aa2.99□□□□□ -1.93
SEC24D-201ENST00000280551 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
SEC24D-201ENST00000280551 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
SEC24D-201ENST00000280551 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
SEC24D-201ENST00000280551 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
SEC24D-201ENST00000280551 LCE4AQ5TA78 99 aa2.84□□□□□ -1.95
SEC24D-201ENST00000280551 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
SEC24D-201ENST00000280551 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
SEC24D-201ENST00000280551 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
SEC24D-201ENST00000280551 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
SEC24D-201ENST00000280551 MT3P25713 68 aa2.73□□□□□ -1.97
SEC24D-201ENST00000280551 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.97
SEC24D-201ENST00000280551 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
SEC24D-201ENST00000280551 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
SEC24D-201ENST00000280551 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
SEC24D-201ENST00000280551 KRTAP4-6Q9BYQ5 205 aa2.68□□□□□ -1.98
SEC24D-201ENST00000280551 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
SEC24D-201ENST00000280551 MT4P47944 62 aa2.55□□□□□ -2
SEC24D-201ENST00000280551 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
SEC24D-201ENST00000280551 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
SEC24D-201ENST00000280551 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
SEC24D-201ENST00000280551 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
SEC24D-201ENST00000280551 KRTAP4-11Q9BYQ6 195 aa2.34□□□□□ -2.04
SEC24D-201ENST00000280551 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
SEC24D-201ENST00000280551 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
SEC24D-201ENST00000280551 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
SEC24D-201ENST00000280551 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
SEC24D-201ENST00000280551 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
SEC24D-201ENST00000280551 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
SEC24D-201ENST00000280551 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
SEC24D-201ENST00000280551 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
SEC24D-201ENST00000280551 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
SEC24D-201ENST00000280551 KRTAP9-9Q9BYP9 154 aa2□□□□□ -2.09
SEC24D-201ENST00000280551 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
SEC24D-201ENST00000280551 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
SEC24D-201ENST00000280551 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
SEC24D-201ENST00000280551 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
SEC24D-201ENST00000280551 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SEC24D-201ENST00000280551 KRTAP4-12Q9BQ66 201 aa1.63□□□□□ -2.15
SEC24D-201ENST00000280551 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 111.4 ms