RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 LCE1EQ5T753 118 aa6.12□□□□□ -1.43
CACNA1B-201ENST00000277549 LCE1FQ5T754 118 aa6.12□□□□□ -1.43
CACNA1B-201ENST00000277549 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
CACNA1B-201ENST00000277549 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
CACNA1B-201ENST00000277549 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
CACNA1B-201ENST00000277549 HYDINQ4G0P3 5121 aa5.91□□□□□ -1.46
CACNA1B-201ENST00000277549 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
CACNA1B-201ENST00000277549 LRP2P98164 4655 aa5.85□□□□□ -1.47
CACNA1B-201ENST00000277549 RYR2Q92736 4967 aa5.84□□□□□ -1.47
CACNA1B-201ENST00000277549 HERC2O95714 4834 aa5.8□□□□□ -1.48
CACNA1B-201ENST00000277549 PCLOQ9Y6V0 5065 aa5.69□□□□□ -1.5
CACNA1B-201ENST00000277549 KRTAP19-2Q3LHN2 52 aa5.69□□□□□ -1.5
CACNA1B-201ENST00000277549 KMT2CQ8NEZ4 4911 aaKnown RBP5.67□□□□□ -1.5
CACNA1B-201ENST00000277549 MT1AP04731 61 aa5.66□□□□□ -1.5
CACNA1B-201ENST00000277549 KRTAP6-2Q3LI66 62 aa5.66□□□□□ -1.5
CACNA1B-201ENST00000277549 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
CACNA1B-201ENST00000277549 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
CACNA1B-201ENST00000277549 KRTAP2-1Q9BYU5 128 aa5.66□□□□□ -1.5
CACNA1B-201ENST00000277549 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.5
CACNA1B-201ENST00000277549 BIRC6Q9NR09 4857 aa5.64□□□□□ -1.51
CACNA1B-201ENST00000277549 KIAA1109Q2LD37 5005 aa5.64□□□□□ -1.51
CACNA1B-201ENST00000277549 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
CACNA1B-201ENST00000277549 KRTAP6-1Q3LI64 71 aa5.51□□□□□ -1.53
CACNA1B-201ENST00000277549 KRTAP19-7Q3SYF9 63 aa5.47□□□□□ -1.53
CACNA1B-201ENST00000277549 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
CACNA1B-201ENST00000277549 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
CACNA1B-201ENST00000277549 KRTAP9-4Q9BYQ2 154 aa5.37□□□□□ -1.55
CACNA1B-201ENST00000277549 LCE2AQ5TA79 106 aaPredicted RBP5.36□□□□□ -1.55
CACNA1B-201ENST00000277549 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
CACNA1B-201ENST00000277549 KRTAP2-2Q9BYT5 123 aa5.35□□□□□ -1.55
CACNA1B-201ENST00000277549 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
CACNA1B-201ENST00000277549 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
CACNA1B-201ENST00000277549 MUC2Q02817 5179 aa5.11□□□□□ -1.59
CACNA1B-201ENST00000277549 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
CACNA1B-201ENST00000277549 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
CACNA1B-201ENST00000277549 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
CACNA1B-201ENST00000277549 ABCA13Q86UQ4 5058 aa4.99□□□□□ -1.61
CACNA1B-201ENST00000277549 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
CACNA1B-201ENST00000277549 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
CACNA1B-201ENST00000277549 KRTAP4-4Q9BYR3 166 aa4.91□□□□□ -1.62
CACNA1B-201ENST00000277549 KRTAP4-12Q9BQ66 201 aa4.91□□□□□ -1.62
CACNA1B-201ENST00000277549 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
CACNA1B-201ENST00000277549 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
CACNA1B-201ENST00000277549 RNF213Q63HN8 5207 aa4.86□□□□□ -1.63
CACNA1B-201ENST00000277549 OBSCNQ5VST9 7968 aa4.79□□□□□ -1.64
CACNA1B-201ENST00000277549 UBR4Q5T4S7 5183 aa4.77□□□□□ -1.65
CACNA1B-201ENST00000277549 KMT2DO14686 5537 aa4.47□□□□□ -1.69
CACNA1B-201ENST00000277549 NEBP20929 6669 aa4.4□□□□□ -1.7
CACNA1B-201ENST00000277549 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
CACNA1B-201ENST00000277549 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
CACNA1B-201ENST00000277549 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
CACNA1B-201ENST00000277549 USH2AO75445 5202 aa4.19□□□□□ -1.74
CACNA1B-201ENST00000277549 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
CACNA1B-201ENST00000277549 SSPOA2VEC9 5147 aa4.09□□□□□ -1.75
CACNA1B-201ENST00000277549 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
CACNA1B-201ENST00000277549 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
CACNA1B-201ENST00000277549 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
CACNA1B-201ENST00000277549 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
CACNA1B-201ENST00000277549 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
CACNA1B-201ENST00000277549 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
CACNA1B-201ENST00000277549 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
CACNA1B-201ENST00000277549 MDN1Q9NU22 5596 aa3.42□□□□□ -1.86
CACNA1B-201ENST00000277549 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
CACNA1B-201ENST00000277549 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
CACNA1B-201ENST00000277549 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
CACNA1B-201ENST00000277549 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
CACNA1B-201ENST00000277549 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
CACNA1B-201ENST00000277549 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
CACNA1B-201ENST00000277549 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
CACNA1B-201ENST00000277549 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
CACNA1B-201ENST00000277549 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
CACNA1B-201ENST00000277549 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
CACNA1B-201ENST00000277549 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
CACNA1B-201ENST00000277549 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
CACNA1B-201ENST00000277549 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
CACNA1B-201ENST00000277549 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
CACNA1B-201ENST00000277549 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 38.4 ms