RNA–Protein interactions for RNA: ENST00000273739.9

SLIT2-201, Transcript of slit guidance ligand 2, humanhuman

TSL 5 BASIC

Gene SLIT2, Length 5,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-201ENST00000273739 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
SLIT2-201ENST00000273739 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
SLIT2-201ENST00000273739 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
SLIT2-201ENST00000273739 MUC17Q685J3 4493 aa4.11□□□□□ -1.75
SLIT2-201ENST00000273739 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.11□□□□□ -1.75
SLIT2-201ENST00000273739 MT1EP04732 61 aa4.09□□□□□ -1.75
SLIT2-201ENST00000273739 FLGP20930 4061 aaPredicted RBP4.08□□□□□ -1.76
SLIT2-201ENST00000273739 MUC2Q02817 5179 aa4.06□□□□□ -1.76
SLIT2-201ENST00000273739 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
SLIT2-201ENST00000273739 MT1LQ93083 61 aa4.06□□□□□ -1.76
SLIT2-201ENST00000273739 KRTAP2-3P0C7H8 128 aa4.05□□□□□ -1.76
SLIT2-201ENST00000273739 KRTAP2-4Q9BYR9 128 aa4.05□□□□□ -1.76
SLIT2-201ENST00000273739 MT1MQ8N339 61 aa4□□□□□ -1.77
SLIT2-201ENST00000273739 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
SLIT2-201ENST00000273739 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
SLIT2-201ENST00000273739 MT3P25713 68 aa3.92□□□□□ -1.78
SLIT2-201ENST00000273739 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
SLIT2-201ENST00000273739 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
SLIT2-201ENST00000273739 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
SLIT2-201ENST00000273739 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
SLIT2-201ENST00000273739 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
SLIT2-201ENST00000273739 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
SLIT2-201ENST00000273739 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
SLIT2-201ENST00000273739 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
SLIT2-201ENST00000273739 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
SLIT2-201ENST00000273739 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
SLIT2-201ENST00000273739 KRTAP19-7Q3SYF9 63 aa3.72□□□□□ -1.81
SLIT2-201ENST00000273739 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
SLIT2-201ENST00000273739 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
SLIT2-201ENST00000273739 MT1AP04731 61 aa3.68□□□□□ -1.82
SLIT2-201ENST00000273739 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
SLIT2-201ENST00000273739 USH2AO75445 5202 aa3.59□□□□□ -1.84
SLIT2-201ENST00000273739 NEBP20929 6669 aa3.58□□□□□ -1.84
SLIT2-201ENST00000273739 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
SLIT2-201ENST00000273739 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
SLIT2-201ENST00000273739 PRM1P04553 51 aa3.52□□□□□ -1.85
SLIT2-201ENST00000273739 KMT2DO14686 5537 aa3.48□□□□□ -1.85
SLIT2-201ENST00000273739 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
SLIT2-201ENST00000273739 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
SLIT2-201ENST00000273739 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
SLIT2-201ENST00000273739 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.86
SLIT2-201ENST00000273739 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
SLIT2-201ENST00000273739 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
SLIT2-201ENST00000273739 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
SLIT2-201ENST00000273739 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
SLIT2-201ENST00000273739 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
SLIT2-201ENST00000273739 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
SLIT2-201ENST00000273739 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
SLIT2-201ENST00000273739 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
SLIT2-201ENST00000273739 MUC12Q9UKN1 5478 aa3.28□□□□□ -1.88
SLIT2-201ENST00000273739 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
SLIT2-201ENST00000273739 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
SLIT2-201ENST00000273739 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
SLIT2-201ENST00000273739 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
SLIT2-201ENST00000273739 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
SLIT2-201ENST00000273739 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
SLIT2-201ENST00000273739 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
SLIT2-201ENST00000273739 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
SLIT2-201ENST00000273739 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
SLIT2-201ENST00000273739 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
SLIT2-201ENST00000273739 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
SLIT2-201ENST00000273739 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
SLIT2-201ENST00000273739 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
SLIT2-201ENST00000273739 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
SLIT2-201ENST00000273739 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
SLIT2-201ENST00000273739 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
SLIT2-201ENST00000273739 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
SLIT2-201ENST00000273739 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
SLIT2-201ENST00000273739 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
SLIT2-201ENST00000273739 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
SLIT2-201ENST00000273739 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
SLIT2-201ENST00000273739 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
SLIT2-201ENST00000273739 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
SLIT2-201ENST00000273739 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
SLIT2-201ENST00000273739 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
SLIT2-201ENST00000273739 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
SLIT2-201ENST00000273739 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 38.7 ms