RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 KMT2CQ8NEZ4 4911 aaKnown RBP2.42□□□□□ -2.02
CLTC-201ENST00000269122 MT1EP04732 61 aa2.41□□□□□ -2.02
CLTC-201ENST00000269122 KRTAP9-2Q9BYQ4 174 aa2.4□□□□□ -2.03
CLTC-201ENST00000269122 ABCA13Q86UQ4 5058 aa2.4□□□□□ -2.03
CLTC-201ENST00000269122 PCLOQ9Y6V0 5065 aa2.38□□□□□ -2.03
CLTC-201ENST00000269122 MT1MQ8N339 61 aa2.34□□□□□ -2.03
CLTC-201ENST00000269122 LCE5AQ5TCM9 118 aa2.3□□□□□ -2.04
CLTC-201ENST00000269122 KRTAP19-6Q3LI70 58 aa2.29□□□□□ -2.04
CLTC-201ENST00000269122 MT3P25713 68 aa2.28□□□□□ -2.04
CLTC-201ENST00000269122 KRTAP9-7A8MTY7 169 aa2.28□□□□□ -2.04
CLTC-201ENST00000269122 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
CLTC-201ENST00000269122 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
CLTC-201ENST00000269122 FSIP2Q5CZC0 6907 aa2.25□□□□□ -2.05
CLTC-201ENST00000269122 KRTAP2-3P0C7H8 128 aa2.25□□□□□ -2.05
CLTC-201ENST00000269122 KRTAP2-4Q9BYR9 128 aa2.25□□□□□ -2.05
CLTC-201ENST00000269122 KRTAP2-1Q9BYU5 128 aa2.25□□□□□ -2.05
CLTC-201ENST00000269122 KRTAP9-6A8MVA2 160 aa2.24□□□□□ -2.05
CLTC-201ENST00000269122 KRTAP9-6A0A140TA67 174 aa2.22□□□□□ -2.05
CLTC-201ENST00000269122 HMCN2Q8NDA2 5059 aa2.21□□□□□ -2.06
CLTC-201ENST00000269122 UBR4Q5T4S7 5183 aa2.2□□□□□ -2.06
CLTC-201ENST00000269122 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
CLTC-201ENST00000269122 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
CLTC-201ENST00000269122 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
CLTC-201ENST00000269122 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
CLTC-201ENST00000269122 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
CLTC-201ENST00000269122 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
CLTC-201ENST00000269122 LCE1AQ5T7P2 110 aa2.16□□□□□ -2.06
CLTC-201ENST00000269122 RNF213Q63HN8 5207 aa2.13□□□□□ -2.07
CLTC-201ENST00000269122 KMT2DO14686 5537 aa2.12□□□□□ -2.07
CLTC-201ENST00000269122 MUC2Q02817 5179 aa2.11□□□□□ -2.07
CLTC-201ENST00000269122 MT1AP04731 61 aa2.1□□□□□ -2.07
CLTC-201ENST00000269122 LCE4AQ5TA78 99 aa2.09□□□□□ -2.07
CLTC-201ENST00000269122 SYNE1Q8NF91 8797 aaKnown RBP2.09□□□□□ -2.08
CLTC-201ENST00000269122 FAT4Q6V0I7 4981 aa2.07□□□□□ -2.08
CLTC-201ENST00000269122 DSTQ03001 7570 aaKnown RBP2.06□□□□□ -2.08
CLTC-201ENST00000269122 LCE2AQ5TA79 106 aaPredicted RBP2.04□□□□□ -2.08
CLTC-201ENST00000269122 KRTAP4-11Q9BYQ6 195 aa2.01□□□□□ -2.09
CLTC-201ENST00000269122 KRTAP9-4Q9BYQ2 154 aa2.01□□□□□ -2.09
CLTC-201ENST00000269122 KRTAP9-1A8MXZ3 250 aaPredicted RBP2□□□□□ -2.09
CLTC-201ENST00000269122 KRTAP2-2Q9BYT5 123 aa2□□□□□ -2.09
CLTC-201ENST00000269122 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
CLTC-201ENST00000269122 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
CLTC-201ENST00000269122 FCGBPQ9Y6R7 5405 aaPredicted RBP1.91□□□□□ -2.1
CLTC-201ENST00000269122 KRTAP4-6Q9BYQ5 205 aa1.83□□□□□ -2.12
CLTC-201ENST00000269122 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
CLTC-201ENST00000269122 KRTAP9-9Q9BYP9 154 aa1.83□□□□□ -2.12
CLTC-201ENST00000269122 USH2AO75445 5202 aa1.81□□□□□ -2.12
CLTC-201ENST00000269122 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
CLTC-201ENST00000269122 KRTAP4-12Q9BQ66 201 aa1.8□□□□□ -2.12
CLTC-201ENST00000269122 KRTAP4-2Q9BYR5 136 aa1.8□□□□□ -2.12
CLTC-201ENST00000269122 SSPOA2VEC9 5147 aa1.74□□□□□ -2.13
CLTC-201ENST00000269122 MACF1Q9UPN3 7388 aaKnown RBP1.71□□□□□ -2.14
CLTC-201ENST00000269122 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
CLTC-201ENST00000269122 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
CLTC-201ENST00000269122 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
CLTC-201ENST00000269122 NEBP20929 6669 aa1.58□□□□□ -2.16
CLTC-201ENST00000269122 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
CLTC-201ENST00000269122 KRTAP5-9P26371 169 aa1.51□□□□□ -2.17
CLTC-201ENST00000269122 KRTAP5-4Q6L8H1 288 aa1.43□□□□□ -2.18
CLTC-201ENST00000269122 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
CLTC-201ENST00000269122 GPR98Q8WXG9 6306 aa1.39□□□□□ -2.19
CLTC-201ENST00000269122 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
CLTC-201ENST00000269122 KRTAP5-3Q6L8H2 238 aa1.29□□□□□ -2.2
CLTC-201ENST00000269122 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
CLTC-201ENST00000269122 MUC5ACP98088 5654 aa1.28□□□□□ -2.2
CLTC-201ENST00000269122 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
CLTC-201ENST00000269122 KRTAP5-8O75690 187 aa1.25□□□□□ -2.21
CLTC-201ENST00000269122 AHNAK2Q8IVF2 5795 aa1.24□□□□□ -2.21
CLTC-201ENST00000269122 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
CLTC-201ENST00000269122 KRTAP5-1Q6L8H4 278 aa1.11□□□□□ -2.23
CLTC-201ENST00000269122 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
CLTC-201ENST00000269122 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
CLTC-201ENST00000269122 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
CLTC-201ENST00000269122 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.98□□□□□ -2.25
CLTC-201ENST00000269122 KRTAP5-11Q6L8G4 156 aa0.9□□□□□ -2.27
CLTC-201ENST00000269122 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
CLTC-201ENST00000269122 KRTAP5-7Q6L8G8 165 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms