RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 LOC100996750A0A140TA64 210 aa6.53□□□□□ -1.36
CPNE7-201ENST00000268720 CRCT1Q9UGL9 99 aa6.49□□□□□ -1.37
CPNE7-201ENST00000268720 KRTAP2-3P0C7H8 128 aa6.44□□□□□ -1.38
CPNE7-201ENST00000268720 KRTAP2-4Q9BYR9 128 aa6.44□□□□□ -1.38
CPNE7-201ENST00000268720 KRTAP2-1Q9BYU5 128 aa6.44□□□□□ -1.38
CPNE7-201ENST00000268720 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
CPNE7-201ENST00000268720 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
CPNE7-201ENST00000268720 MT1GP13640 62 aa6.35□□□□□ -1.39
CPNE7-201ENST00000268720 SYNE1Q8NF91 8797 aaKnown RBP6.33□□□□□ -1.4
CPNE7-201ENST00000268720 MACF1Q9UPN3 7388 aaKnown RBP6.33□□□□□ -1.4
CPNE7-201ENST00000268720 SYNE2Q8WXH0 6885 aaKnown RBP6.3□□□□□ -1.4
CPNE7-201ENST00000268720 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
CPNE7-201ENST00000268720 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
CPNE7-201ENST00000268720 MT1MQ8N339 61 aa6.21□□□□□ -1.42
CPNE7-201ENST00000268720 OBSCNQ5VST9 7968 aa6.14□□□□□ -1.43
CPNE7-201ENST00000268720 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
CPNE7-201ENST00000268720 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
CPNE7-201ENST00000268720 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
CPNE7-201ENST00000268720 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
CPNE7-201ENST00000268720 KRTAP9-2Q9BYQ4 174 aa5.91□□□□□ -1.46
CPNE7-201ENST00000268720 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
CPNE7-201ENST00000268720 LCE1AQ5T7P2 110 aa5.73□□□□□ -1.49
CPNE7-201ENST00000268720 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
CPNE7-201ENST00000268720 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
CPNE7-201ENST00000268720 SPRR2EP22531 72 aa5.59□□□□□ -1.51
CPNE7-201ENST00000268720 SPRR2BP35325 72 aa5.59□□□□□ -1.51
CPNE7-201ENST00000268720 SPRR2AP35326 72 aa5.59□□□□□ -1.51
CPNE7-201ENST00000268720 MT1AP04731 61 aa5.52□□□□□ -1.53
CPNE7-201ENST00000268720 KRTAP5-5Q701N2 237 aaPredicted RBP5.51□□□□□ -1.53
CPNE7-201ENST00000268720 KRTAP9-6A0A140TA67 174 aa5.44□□□□□ -1.54
CPNE7-201ENST00000268720 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
CPNE7-201ENST00000268720 LCE3DQ9BYE3 92 aa5.36□□□□□ -1.55
CPNE7-201ENST00000268720 SPRR2DP22532 72 aa5.34□□□□□ -1.55
CPNE7-201ENST00000268720 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
CPNE7-201ENST00000268720 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
CPNE7-201ENST00000268720 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
CPNE7-201ENST00000268720 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
CPNE7-201ENST00000268720 PRM1P04553 51 aa5.19□□□□□ -1.58
CPNE7-201ENST00000268720 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
CPNE7-201ENST00000268720 MT3P25713 68 aa4.96□□□□□ -1.62
CPNE7-201ENST00000268720 NEBP20929 6669 aa4.94□□□□□ -1.62
CPNE7-201ENST00000268720 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.62
CPNE7-201ENST00000268720 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
CPNE7-201ENST00000268720 MT4P47944 62 aa4.81□□□□□ -1.64
CPNE7-201ENST00000268720 HMCN1Q96RW7 5635 aa4.67□□□□□ -1.66
CPNE7-201ENST00000268720 KRTAP20-2Q3LI61 65 aa4.63□□□□□ -1.67
CPNE7-201ENST00000268720 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
CPNE7-201ENST00000268720 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
CPNE7-201ENST00000268720 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
CPNE7-201ENST00000268720 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
CPNE7-201ENST00000268720 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
CPNE7-201ENST00000268720 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
CPNE7-201ENST00000268720 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
CPNE7-201ENST00000268720 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
CPNE7-201ENST00000268720 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
CPNE7-201ENST00000268720 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
CPNE7-201ENST00000268720 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
CPNE7-201ENST00000268720 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
CPNE7-201ENST00000268720 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.78
CPNE7-201ENST00000268720 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
CPNE7-201ENST00000268720 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
CPNE7-201ENST00000268720 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
CPNE7-201ENST00000268720 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
CPNE7-201ENST00000268720 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
CPNE7-201ENST00000268720 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
CPNE7-201ENST00000268720 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
CPNE7-201ENST00000268720 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
CPNE7-201ENST00000268720 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
CPNE7-201ENST00000268720 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
CPNE7-201ENST00000268720 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
CPNE7-201ENST00000268720 KRTAP4-12Q9BQ66 201 aa3.44□□□□□ -1.86
CPNE7-201ENST00000268720 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
CPNE7-201ENST00000268720 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
CPNE7-201ENST00000268720 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
CPNE7-201ENST00000268720 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
CPNE7-201ENST00000268720 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
CPNE7-201ENST00000268720 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 115 ms