RNA–Protein interactions for RNA: ENST00000265361.7

SEMA3C-201, Transcript of semaphorin 3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA3C, Length 5,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-201ENST00000265361 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
SEMA3C-201ENST00000265361 LCE2DQ5TA82 110 aaPredicted RBP5.7□□□□□ -1.5
SEMA3C-201ENST00000265361 MT1LQ93083 61 aa5.66□□□□□ -1.5
SEMA3C-201ENST00000265361 MT1EP04732 61 aa5.57□□□□□ -1.52
SEMA3C-201ENST00000265361 MT3P25713 68 aa5.55□□□□□ -1.52
SEMA3C-201ENST00000265361 LCE2AQ5TA79 106 aaPredicted RBP5.5□□□□□ -1.53
SEMA3C-201ENST00000265361 MT4P47944 62 aa5.48□□□□□ -1.53
SEMA3C-201ENST00000265361 MT1MQ8N339 61 aa5.44□□□□□ -1.54
SEMA3C-201ENST00000265361 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
SEMA3C-201ENST00000265361 USH2AO75445 5202 aa5.42□□□□□ -1.54
SEMA3C-201ENST00000265361 LCE1BQ5T7P3 118 aa5.39□□□□□ -1.55
SEMA3C-201ENST00000265361 PRM1P04553 51 aa5.37□□□□□ -1.55
SEMA3C-201ENST00000265361 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
SEMA3C-201ENST00000265361 KMT2DO14686 5537 aa5.35□□□□□ -1.55
SEMA3C-201ENST00000265361 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
SEMA3C-201ENST00000265361 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
SEMA3C-201ENST00000265361 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
SEMA3C-201ENST00000265361 KRTAP2-3P0C7H8 128 aa5.31□□□□□ -1.56
SEMA3C-201ENST00000265361 KRTAP2-4Q9BYR9 128 aa5.31□□□□□ -1.56
SEMA3C-201ENST00000265361 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
SEMA3C-201ENST00000265361 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
SEMA3C-201ENST00000265361 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
SEMA3C-201ENST00000265361 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.59
SEMA3C-201ENST00000265361 MT1AP04731 61 aa5.11□□□□□ -1.59
SEMA3C-201ENST00000265361 FCGBPQ9Y6R7 5405 aaPredicted RBP5.07□□□□□ -1.6
SEMA3C-201ENST00000265361 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
SEMA3C-201ENST00000265361 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
SEMA3C-201ENST00000265361 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
SEMA3C-201ENST00000265361 KRTAP9-6A0A140TA67 174 aa4.98□□□□□ -1.61
SEMA3C-201ENST00000265361 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
SEMA3C-201ENST00000265361 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.62
SEMA3C-201ENST00000265361 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
SEMA3C-201ENST00000265361 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
SEMA3C-201ENST00000265361 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
SEMA3C-201ENST00000265361 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
SEMA3C-201ENST00000265361 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
SEMA3C-201ENST00000265361 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
SEMA3C-201ENST00000265361 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
SEMA3C-201ENST00000265361 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
SEMA3C-201ENST00000265361 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
SEMA3C-201ENST00000265361 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
SEMA3C-201ENST00000265361 LCE1FQ5T754 118 aa4.66□□□□□ -1.66
SEMA3C-201ENST00000265361 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.67
SEMA3C-201ENST00000265361 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
SEMA3C-201ENST00000265361 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
SEMA3C-201ENST00000265361 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
SEMA3C-201ENST00000265361 MUC19Q7Z5P9 8384 aa4.37□□□□□ -1.71
SEMA3C-201ENST00000265361 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
SEMA3C-201ENST00000265361 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
SEMA3C-201ENST00000265361 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
SEMA3C-201ENST00000265361 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
SEMA3C-201ENST00000265361 NEBP20929 6669 aa4.08□□□□□ -1.76
SEMA3C-201ENST00000265361 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
SEMA3C-201ENST00000265361 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
SEMA3C-201ENST00000265361 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
SEMA3C-201ENST00000265361 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
SEMA3C-201ENST00000265361 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
SEMA3C-201ENST00000265361 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
SEMA3C-201ENST00000265361 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
SEMA3C-201ENST00000265361 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
SEMA3C-201ENST00000265361 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
SEMA3C-201ENST00000265361 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
SEMA3C-201ENST00000265361 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
SEMA3C-201ENST00000265361 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
SEMA3C-201ENST00000265361 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
SEMA3C-201ENST00000265361 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
SEMA3C-201ENST00000265361 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SEMA3C-201ENST00000265361 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
SEMA3C-201ENST00000265361 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
SEMA3C-201ENST00000265361 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SEMA3C-201ENST00000265361 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
SEMA3C-201ENST00000265361 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
SEMA3C-201ENST00000265361 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
SEMA3C-201ENST00000265361 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
SEMA3C-201ENST00000265361 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
SEMA3C-201ENST00000265361 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
SEMA3C-201ENST00000265361 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 53.5 ms