RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 MT1EP04732 61 aa4.26□□□□□ -1.73
HERC6-201ENST00000264346 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
HERC6-201ENST00000264346 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
HERC6-201ENST00000264346 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
HERC6-201ENST00000264346 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
HERC6-201ENST00000264346 SSPOA2VEC9 5147 aa4.21□□□□□ -1.74
HERC6-201ENST00000264346 SYNE2Q8WXH0 6885 aaKnown RBP4.17□□□□□ -1.74
HERC6-201ENST00000264346 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
HERC6-201ENST00000264346 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
HERC6-201ENST00000264346 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
HERC6-201ENST00000264346 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
HERC6-201ENST00000264346 MT1MQ8N339 61 aa4.05□□□□□ -1.76
HERC6-201ENST00000264346 SPRR2EP22531 72 aa4.03□□□□□ -1.76
HERC6-201ENST00000264346 SPRR2BP35325 72 aa4.03□□□□□ -1.76
HERC6-201ENST00000264346 SPRR2AP35326 72 aa4.03□□□□□ -1.76
HERC6-201ENST00000264346 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
HERC6-201ENST00000264346 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
HERC6-201ENST00000264346 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
HERC6-201ENST00000264346 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
HERC6-201ENST00000264346 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
HERC6-201ENST00000264346 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
HERC6-201ENST00000264346 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
HERC6-201ENST00000264346 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
HERC6-201ENST00000264346 SPRR2DP22532 72 aa3.84□□□□□ -1.79
HERC6-201ENST00000264346 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
HERC6-201ENST00000264346 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
HERC6-201ENST00000264346 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
HERC6-201ENST00000264346 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
HERC6-201ENST00000264346 KRTAP9-6A0A140TA67 174 aa3.67□□□□□ -1.82
HERC6-201ENST00000264346 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
HERC6-201ENST00000264346 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.82
HERC6-201ENST00000264346 PRM1P04553 51 aa3.63□□□□□ -1.83
HERC6-201ENST00000264346 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
HERC6-201ENST00000264346 MT1AP04731 61 aa3.6□□□□□ -1.83
HERC6-201ENST00000264346 MT4P47944 62 aa3.56□□□□□ -1.84
HERC6-201ENST00000264346 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
HERC6-201ENST00000264346 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
HERC6-201ENST00000264346 MT3P25713 68 aa3.46□□□□□ -1.86
HERC6-201ENST00000264346 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
HERC6-201ENST00000264346 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
HERC6-201ENST00000264346 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
HERC6-201ENST00000264346 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
HERC6-201ENST00000264346 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
HERC6-201ENST00000264346 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
HERC6-201ENST00000264346 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
HERC6-201ENST00000264346 NEBP20929 6669 aa3.24□□□□□ -1.89
HERC6-201ENST00000264346 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
HERC6-201ENST00000264346 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
HERC6-201ENST00000264346 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
HERC6-201ENST00000264346 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
HERC6-201ENST00000264346 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
HERC6-201ENST00000264346 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
HERC6-201ENST00000264346 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
HERC6-201ENST00000264346 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
HERC6-201ENST00000264346 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
HERC6-201ENST00000264346 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
HERC6-201ENST00000264346 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
HERC6-201ENST00000264346 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
HERC6-201ENST00000264346 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
HERC6-201ENST00000264346 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
HERC6-201ENST00000264346 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
HERC6-201ENST00000264346 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2.01
HERC6-201ENST00000264346 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
HERC6-201ENST00000264346 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
HERC6-201ENST00000264346 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
HERC6-201ENST00000264346 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
HERC6-201ENST00000264346 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
HERC6-201ENST00000264346 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
HERC6-201ENST00000264346 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
HERC6-201ENST00000264346 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
HERC6-201ENST00000264346 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
HERC6-201ENST00000264346 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
HERC6-201ENST00000264346 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
HERC6-201ENST00000264346 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
HERC6-201ENST00000264346 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
HERC6-201ENST00000264346 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
HERC6-201ENST00000264346 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 101.4 ms