RNA–Protein interactions for RNA: ENST00000263238.6

ACTR3-201, Transcript of ARP3 actin related protein 3 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3, Length 6,718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-201ENST00000263238 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
ACTR3-201ENST00000263238 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
ACTR3-201ENST00000263238 HMCN2Q8NDA2 5059 aa3.87□□□□□ -1.79
ACTR3-201ENST00000263238 MT3P25713 68 aa3.79□□□□□ -1.8
ACTR3-201ENST00000263238 MT4P47944 62 aa3.77□□□□□ -1.81
ACTR3-201ENST00000263238 BIRC6Q9NR09 4857 aa3.77□□□□□ -1.81
ACTR3-201ENST00000263238 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
ACTR3-201ENST00000263238 LCE2DQ5TA82 110 aaPredicted RBP3.73□□□□□ -1.81
ACTR3-201ENST00000263238 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
ACTR3-201ENST00000263238 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
ACTR3-201ENST00000263238 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
ACTR3-201ENST00000263238 PCLOQ9Y6V0 5065 aa3.69□□□□□ -1.82
ACTR3-201ENST00000263238 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
ACTR3-201ENST00000263238 MT1AP04731 61 aa3.66□□□□□ -1.82
ACTR3-201ENST00000263238 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
ACTR3-201ENST00000263238 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
ACTR3-201ENST00000263238 ABCA13Q86UQ4 5058 aa3.6□□□□□ -1.83
ACTR3-201ENST00000263238 MUC2Q02817 5179 aa3.59□□□□□ -1.84
ACTR3-201ENST00000263238 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.84
ACTR3-201ENST00000263238 EPPK1P58107 5090 aaKnown RBP3.57□□□□□ -1.84
ACTR3-201ENST00000263238 FAT4Q6V0I7 4981 aa3.57□□□□□ -1.84
ACTR3-201ENST00000263238 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
ACTR3-201ENST00000263238 KMT2DO14686 5537 aa3.44□□□□□ -1.86
ACTR3-201ENST00000263238 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
ACTR3-201ENST00000263238 FSIP2Q5CZC0 6907 aa3.43□□□□□ -1.86
ACTR3-201ENST00000263238 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
ACTR3-201ENST00000263238 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
ACTR3-201ENST00000263238 RNF213Q63HN8 5207 aa3.4□□□□□ -1.87
ACTR3-201ENST00000263238 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
ACTR3-201ENST00000263238 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
ACTR3-201ENST00000263238 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
ACTR3-201ENST00000263238 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
ACTR3-201ENST00000263238 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
ACTR3-201ENST00000263238 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
ACTR3-201ENST00000263238 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
ACTR3-201ENST00000263238 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
ACTR3-201ENST00000263238 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
ACTR3-201ENST00000263238 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
ACTR3-201ENST00000263238 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
ACTR3-201ENST00000263238 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
ACTR3-201ENST00000263238 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
ACTR3-201ENST00000263238 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
ACTR3-201ENST00000263238 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
ACTR3-201ENST00000263238 USH2AO75445 5202 aa2.96□□□□□ -1.94
ACTR3-201ENST00000263238 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
ACTR3-201ENST00000263238 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.84□□□□□ -1.96
ACTR3-201ENST00000263238 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
ACTR3-201ENST00000263238 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
ACTR3-201ENST00000263238 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
ACTR3-201ENST00000263238 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
ACTR3-201ENST00000263238 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
ACTR3-201ENST00000263238 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
ACTR3-201ENST00000263238 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
ACTR3-201ENST00000263238 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
ACTR3-201ENST00000263238 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
ACTR3-201ENST00000263238 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
ACTR3-201ENST00000263238 NEBP20929 6669 aa2.43□□□□□ -2.02
ACTR3-201ENST00000263238 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
ACTR3-201ENST00000263238 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
ACTR3-201ENST00000263238 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
ACTR3-201ENST00000263238 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
ACTR3-201ENST00000263238 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
ACTR3-201ENST00000263238 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
ACTR3-201ENST00000263238 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
ACTR3-201ENST00000263238 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
ACTR3-201ENST00000263238 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
ACTR3-201ENST00000263238 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
ACTR3-201ENST00000263238 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
ACTR3-201ENST00000263238 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
ACTR3-201ENST00000263238 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
ACTR3-201ENST00000263238 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
ACTR3-201ENST00000263238 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
ACTR3-201ENST00000263238 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
ACTR3-201ENST00000263238 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
ACTR3-201ENST00000263238 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
ACTR3-201ENST00000263238 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
ACTR3-201ENST00000263238 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms