RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 LCE2AQ5TA79 106 aaPredicted RBP5.29□□□□□ -1.56
SREBF1-201ENST00000261646 MT1EP04732 61 aa5.24□□□□□ -1.57
SREBF1-201ENST00000261646 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
SREBF1-201ENST00000261646 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
SREBF1-201ENST00000261646 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
SREBF1-201ENST00000261646 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
SREBF1-201ENST00000261646 KRTAP2-3P0C7H8 128 aa5.18□□□□□ -1.58
SREBF1-201ENST00000261646 KRTAP2-4Q9BYR9 128 aa5.18□□□□□ -1.58
SREBF1-201ENST00000261646 KRTAP2-1Q9BYU5 128 aa5.18□□□□□ -1.58
SREBF1-201ENST00000261646 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
SREBF1-201ENST00000261646 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
SREBF1-201ENST00000261646 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
SREBF1-201ENST00000261646 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
SREBF1-201ENST00000261646 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
SREBF1-201ENST00000261646 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
SREBF1-201ENST00000261646 MT1MQ8N339 61 aa4.98□□□□□ -1.61
SREBF1-201ENST00000261646 LCE2DQ5TA82 110 aaPredicted RBP4.96□□□□□ -1.62
SREBF1-201ENST00000261646 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
SREBF1-201ENST00000261646 SPRR2EP22531 72 aa4.93□□□□□ -1.62
SREBF1-201ENST00000261646 SPRR2BP35325 72 aa4.93□□□□□ -1.62
SREBF1-201ENST00000261646 SPRR2AP35326 72 aa4.93□□□□□ -1.62
SREBF1-201ENST00000261646 PRM1P04553 51 aa4.92□□□□□ -1.62
SREBF1-201ENST00000261646 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
SREBF1-201ENST00000261646 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
SREBF1-201ENST00000261646 KRTAP9-6A0A140TA67 174 aa4.86□□□□□ -1.63
SREBF1-201ENST00000261646 SPRR2DP22532 72 aa4.7□□□□□ -1.66
SREBF1-201ENST00000261646 MACF1Q9UPN3 7388 aaKnown RBP4.64□□□□□ -1.67
SREBF1-201ENST00000261646 MT1AP04731 61 aa4.57□□□□□ -1.68
SREBF1-201ENST00000261646 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
SREBF1-201ENST00000261646 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
SREBF1-201ENST00000261646 MT3P25713 68 aa4.53□□□□□ -1.68
SREBF1-201ENST00000261646 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
SREBF1-201ENST00000261646 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
SREBF1-201ENST00000261646 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
SREBF1-201ENST00000261646 MT4P47944 62 aa4.36□□□□□ -1.71
SREBF1-201ENST00000261646 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
SREBF1-201ENST00000261646 MDN1Q9NU22 5596 aa4.35□□□□□ -1.71
SREBF1-201ENST00000261646 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
SREBF1-201ENST00000261646 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
SREBF1-201ENST00000261646 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
SREBF1-201ENST00000261646 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
SREBF1-201ENST00000261646 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
SREBF1-201ENST00000261646 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
SREBF1-201ENST00000261646 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
SREBF1-201ENST00000261646 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
SREBF1-201ENST00000261646 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
SREBF1-201ENST00000261646 NEBP20929 6669 aa3.96□□□□□ -1.78
SREBF1-201ENST00000261646 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
SREBF1-201ENST00000261646 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
SREBF1-201ENST00000261646 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
SREBF1-201ENST00000261646 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
SREBF1-201ENST00000261646 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
SREBF1-201ENST00000261646 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
SREBF1-201ENST00000261646 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
SREBF1-201ENST00000261646 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
SREBF1-201ENST00000261646 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
SREBF1-201ENST00000261646 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
SREBF1-201ENST00000261646 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
SREBF1-201ENST00000261646 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
SREBF1-201ENST00000261646 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
SREBF1-201ENST00000261646 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
SREBF1-201ENST00000261646 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
SREBF1-201ENST00000261646 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
SREBF1-201ENST00000261646 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
SREBF1-201ENST00000261646 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
SREBF1-201ENST00000261646 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
SREBF1-201ENST00000261646 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
SREBF1-201ENST00000261646 KRTAP5-8O75690 187 aa2.71□□□□□ -1.97
SREBF1-201ENST00000261646 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
SREBF1-201ENST00000261646 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
SREBF1-201ENST00000261646 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -2
SREBF1-201ENST00000261646 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SREBF1-201ENST00000261646 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
SREBF1-201ENST00000261646 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
SREBF1-201ENST00000261646 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
SREBF1-201ENST00000261646 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
SREBF1-201ENST00000261646 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms