RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 LCE2CQ5TA81 110 aa2.22□□□□□ -2.05
HERC2-201ENST00000261609 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
HERC2-201ENST00000261609 KRTAP17-1Q9BYP8 105 aa2.21□□□□□ -2.06
HERC2-201ENST00000261609 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
HERC2-201ENST00000261609 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
HERC2-201ENST00000261609 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
HERC2-201ENST00000261609 LOC100996750A0A140TA64 210 aa2.19□□□□□ -2.06
HERC2-201ENST00000261609 MT1MQ8N339 61 aa2.15□□□□□ -2.06
HERC2-201ENST00000261609 KRTAP19-2Q3LHN2 52 aa2.15□□□□□ -2.07
HERC2-201ENST00000261609 KRTAP4-9Q9BYQ8 210 aa2.11□□□□□ -2.07
HERC2-201ENST00000261609 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
HERC2-201ENST00000261609 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
HERC2-201ENST00000261609 LCE2DQ5TA82 110 aaPredicted RBP2.09□□□□□ -2.07
HERC2-201ENST00000261609 SYNE2Q8WXH0 6885 aaKnown RBP2.09□□□□□ -2.08
HERC2-201ENST00000261609 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
HERC2-201ENST00000261609 USH2AO75445 5202 aa2.05□□□□□ -2.08
HERC2-201ENST00000261609 MT1AP04731 61 aa2.05□□□□□ -2.08
HERC2-201ENST00000261609 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
HERC2-201ENST00000261609 FCGBPQ9Y6R7 5405 aaPredicted RBP2.03□□□□□ -2.08
HERC2-201ENST00000261609 MUC2Q02817 5179 aa2.02□□□□□ -2.09
HERC2-201ENST00000261609 LCE1DQ5T752 114 aa2.02□□□□□ -2.09
HERC2-201ENST00000261609 KRTAP6-2Q3LI66 62 aa2.01□□□□□ -2.09
HERC2-201ENST00000261609 LCE1AQ5T7P2 110 aa2.01□□□□□ -2.09
HERC2-201ENST00000261609 MT4P47944 62 aa2.01□□□□□ -2.09
HERC2-201ENST00000261609 KRTAP19-7Q3SYF9 63 aa2□□□□□ -2.09
HERC2-201ENST00000261609 FSIP2Q5CZC0 6907 aa2□□□□□ -2.09
HERC2-201ENST00000261609 KRTAP19-6Q3LI70 58 aa2□□□□□ -2.09
HERC2-201ENST00000261609 KMT2DO14686 5537 aa2□□□□□ -2.09
HERC2-201ENST00000261609 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
HERC2-201ENST00000261609 KRTAP9-7A8MTY7 169 aa1.98□□□□□ -2.09
HERC2-201ENST00000261609 LCE1EQ5T753 118 aa1.93□□□□□ -2.1
HERC2-201ENST00000261609 KRTAP2-2Q9BYT5 123 aa1.93□□□□□ -2.1
HERC2-201ENST00000261609 KRTAP9-2Q9BYQ4 174 aa1.91□□□□□ -2.1
HERC2-201ENST00000261609 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
HERC2-201ENST00000261609 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.11
HERC2-201ENST00000261609 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
HERC2-201ENST00000261609 KRTAP9-6A0A140TA67 174 aa1.87□□□□□ -2.11
HERC2-201ENST00000261609 KRTAP9-4Q9BYQ2 154 aa1.86□□□□□ -2.11
HERC2-201ENST00000261609 LCE2AQ5TA79 106 aaPredicted RBP1.85□□□□□ -2.11
HERC2-201ENST00000261609 LCE5AQ5TCM9 118 aa1.84□□□□□ -2.11
HERC2-201ENST00000261609 LCE1FQ5T754 118 aa1.76□□□□□ -2.13
HERC2-201ENST00000261609 SSPOA2VEC9 5147 aa1.75□□□□□ -2.13
HERC2-201ENST00000261609 LCE4AQ5TA78 99 aa1.74□□□□□ -2.13
HERC2-201ENST00000261609 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
HERC2-201ENST00000261609 NEBP20929 6669 aa1.73□□□□□ -2.13
HERC2-201ENST00000261609 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
HERC2-201ENST00000261609 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.13
HERC2-201ENST00000261609 SYNE1Q8NF91 8797 aaKnown RBP1.71□□□□□ -2.14
HERC2-201ENST00000261609 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
HERC2-201ENST00000261609 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
HERC2-201ENST00000261609 KRTAP4-11Q9BYQ6 195 aa1.7□□□□□ -2.14
HERC2-201ENST00000261609 KRTAP20-1Q3LI63 56 aa1.69□□□□□ -2.14
HERC2-201ENST00000261609 OBSCNQ5VST9 7968 aa1.68□□□□□ -2.14
HERC2-201ENST00000261609 KRTAP5-5Q701N2 237 aaPredicted RBP1.65□□□□□ -2.14
HERC2-201ENST00000261609 KRTAP9-9Q9BYP9 154 aa1.55□□□□□ -2.16
HERC2-201ENST00000261609 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.55□□□□□ -2.16
HERC2-201ENST00000261609 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
HERC2-201ENST00000261609 KRTAP5-9P26371 169 aa1.51□□□□□ -2.17
HERC2-201ENST00000261609 KRTAP4-4Q9BYR3 166 aa1.48□□□□□ -2.17
HERC2-201ENST00000261609 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
HERC2-201ENST00000261609 KRTAP4-6Q9BYQ5 205 aa1.43□□□□□ -2.18
HERC2-201ENST00000261609 KRTAP4-12Q9BQ66 201 aa1.35□□□□□ -2.19
HERC2-201ENST00000261609 KRTAP4-2Q9BYR5 136 aa1.35□□□□□ -2.19
HERC2-201ENST00000261609 KRTAP5-4Q6L8H1 288 aa1.35□□□□□ -2.19
HERC2-201ENST00000261609 MUC19Q7Z5P9 8384 aa1.24□□□□□ -2.21
HERC2-201ENST00000261609 KRTAP5-2Q701N4 177 aa1.2□□□□□ -2.22
HERC2-201ENST00000261609 KRTAP5-3Q6L8H2 238 aa1.15□□□□□ -2.23
HERC2-201ENST00000261609 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
HERC2-201ENST00000261609 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
HERC2-201ENST00000261609 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.07□□□□□ -2.24
HERC2-201ENST00000261609 KRTAP5-8O75690 187 aa1.04□□□□□ -2.24
HERC2-201ENST00000261609 KRTAP5-1Q6L8H4 278 aa1.03□□□□□ -2.25
HERC2-201ENST00000261609 KRTAP5-11Q6L8G4 156 aa0.99□□□□□ -2.25
HERC2-201ENST00000261609 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
HERC2-201ENST00000261609 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
HERC2-201ENST00000261609 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
HERC2-201ENST00000261609 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms