RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
KLF3-201ENST00000261438 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
KLF3-201ENST00000261438 MT1MQ8N339 61 aa5.27□□□□□ -1.57
KLF3-201ENST00000261438 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
KLF3-201ENST00000261438 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
KLF3-201ENST00000261438 SPRR2EP22531 72 aa5.24□□□□□ -1.57
KLF3-201ENST00000261438 SPRR2BP35325 72 aa5.24□□□□□ -1.57
KLF3-201ENST00000261438 SPRR2AP35326 72 aa5.24□□□□□ -1.57
KLF3-201ENST00000261438 MUC2Q02817 5179 aa5.22□□□□□ -1.57
KLF3-201ENST00000261438 FAT4Q6V0I7 4981 aa5.17□□□□□ -1.58
KLF3-201ENST00000261438 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
KLF3-201ENST00000261438 RNF213Q63HN8 5207 aa5.09□□□□□ -1.59
KLF3-201ENST00000261438 SPRR2DP22532 72 aa5.04□□□□□ -1.6
KLF3-201ENST00000261438 MT3P25713 68 aa4.99□□□□□ -1.61
KLF3-201ENST00000261438 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
KLF3-201ENST00000261438 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
KLF3-201ENST00000261438 MT1AP04731 61 aa4.92□□□□□ -1.62
KLF3-201ENST00000261438 FCGBPQ9Y6R7 5405 aaPredicted RBP4.83□□□□□ -1.64
KLF3-201ENST00000261438 KRTAP9-7A8MTY7 169 aa4.8□□□□□ -1.64
KLF3-201ENST00000261438 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
KLF3-201ENST00000261438 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
KLF3-201ENST00000261438 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
KLF3-201ENST00000261438 KRTAP9-2Q9BYQ4 174 aa4.72□□□□□ -1.65
KLF3-201ENST00000261438 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
KLF3-201ENST00000261438 LCE2AQ5TA79 106 aaPredicted RBP4.68□□□□□ -1.66
KLF3-201ENST00000261438 KMT2DO14686 5537 aa4.67□□□□□ -1.66
KLF3-201ENST00000261438 LCE2DQ5TA82 110 aaPredicted RBP4.6□□□□□ -1.67
KLF3-201ENST00000261438 USH2AO75445 5202 aa4.6□□□□□ -1.67
KLF3-201ENST00000261438 MT4P47944 62 aa4.58□□□□□ -1.68
KLF3-201ENST00000261438 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
KLF3-201ENST00000261438 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
KLF3-201ENST00000261438 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
KLF3-201ENST00000261438 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
KLF3-201ENST00000261438 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
KLF3-201ENST00000261438 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
KLF3-201ENST00000261438 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
KLF3-201ENST00000261438 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
KLF3-201ENST00000261438 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
KLF3-201ENST00000261438 KRTAP6-3Q3LI67 103 aa4.15□□□□□ -1.74
KLF3-201ENST00000261438 KRTAP5-5Q701N2 237 aaPredicted RBP4.09□□□□□ -1.75
KLF3-201ENST00000261438 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
KLF3-201ENST00000261438 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
KLF3-201ENST00000261438 MUC19Q7Z5P9 8384 aa3.97□□□□□ -1.77
KLF3-201ENST00000261438 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
KLF3-201ENST00000261438 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
KLF3-201ENST00000261438 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.75□□□□□ -1.81
KLF3-201ENST00000261438 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
KLF3-201ENST00000261438 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
KLF3-201ENST00000261438 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
KLF3-201ENST00000261438 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
KLF3-201ENST00000261438 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
KLF3-201ENST00000261438 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
KLF3-201ENST00000261438 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
KLF3-201ENST00000261438 NEBP20929 6669 aa3.48□□□□□ -1.85
KLF3-201ENST00000261438 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
KLF3-201ENST00000261438 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
KLF3-201ENST00000261438 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
KLF3-201ENST00000261438 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
KLF3-201ENST00000261438 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.9
KLF3-201ENST00000261438 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.9
KLF3-201ENST00000261438 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
KLF3-201ENST00000261438 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
KLF3-201ENST00000261438 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
KLF3-201ENST00000261438 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
KLF3-201ENST00000261438 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
KLF3-201ENST00000261438 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.97
KLF3-201ENST00000261438 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
KLF3-201ENST00000261438 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -2
KLF3-201ENST00000261438 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
KLF3-201ENST00000261438 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
KLF3-201ENST00000261438 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
KLF3-201ENST00000261438 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
KLF3-201ENST00000261438 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
KLF3-201ENST00000261438 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
KLF3-201ENST00000261438 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
KLF3-201ENST00000261438 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
KLF3-201ENST00000261438 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms