RNA–Protein interactions for RNA: ENST00000260795.6

FGFR3-201, Transcript of fibroblast growth factor receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR3, Length 4,132 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-201ENST00000260795 SPRR2AP35326 72 aa4.89□□□□□ -1.63
FGFR3-201ENST00000260795 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
FGFR3-201ENST00000260795 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
FGFR3-201ENST00000260795 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
FGFR3-201ENST00000260795 MT1LQ93083 61 aa4.81□□□□□ -1.64
FGFR3-201ENST00000260795 MT1EP04732 61 aa4.79□□□□□ -1.64
FGFR3-201ENST00000260795 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
FGFR3-201ENST00000260795 KRTAP19-6Q3LI70 58 aa4.76□□□□□ -1.65
FGFR3-201ENST00000260795 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
FGFR3-201ENST00000260795 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
FGFR3-201ENST00000260795 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
FGFR3-201ENST00000260795 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
FGFR3-201ENST00000260795 KRTAP19-3Q7Z4W3 81 aa4.71□□□□□ -1.65
FGFR3-201ENST00000260795 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
FGFR3-201ENST00000260795 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
FGFR3-201ENST00000260795 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
FGFR3-201ENST00000260795 SPRR2DP22532 72 aa4.68□□□□□ -1.66
FGFR3-201ENST00000260795 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
FGFR3-201ENST00000260795 MT1MQ8N339 61 aa4.59□□□□□ -1.67
FGFR3-201ENST00000260795 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
FGFR3-201ENST00000260795 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
FGFR3-201ENST00000260795 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
FGFR3-201ENST00000260795 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.7
FGFR3-201ENST00000260795 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
FGFR3-201ENST00000260795 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
FGFR3-201ENST00000260795 MT4P47944 62 aa4.34□□□□□ -1.71
FGFR3-201ENST00000260795 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
FGFR3-201ENST00000260795 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
FGFR3-201ENST00000260795 MDN1Q9NU22 5596 aa4.21□□□□□ -1.73
FGFR3-201ENST00000260795 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
FGFR3-201ENST00000260795 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.21□□□□□ -1.74
FGFR3-201ENST00000260795 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
FGFR3-201ENST00000260795 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
FGFR3-201ENST00000260795 PRM1P04553 51 aa4.14□□□□□ -1.75
FGFR3-201ENST00000260795 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
FGFR3-201ENST00000260795 MT1AP04731 61 aa4.08□□□□□ -1.76
FGFR3-201ENST00000260795 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
FGFR3-201ENST00000260795 MT3P25713 68 aa4.06□□□□□ -1.76
FGFR3-201ENST00000260795 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
FGFR3-201ENST00000260795 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
FGFR3-201ENST00000260795 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
FGFR3-201ENST00000260795 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
FGFR3-201ENST00000260795 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
FGFR3-201ENST00000260795 NEBP20929 6669 aa3.86□□□□□ -1.79
FGFR3-201ENST00000260795 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.8
FGFR3-201ENST00000260795 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
FGFR3-201ENST00000260795 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
FGFR3-201ENST00000260795 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
FGFR3-201ENST00000260795 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
FGFR3-201ENST00000260795 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
FGFR3-201ENST00000260795 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
FGFR3-201ENST00000260795 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
FGFR3-201ENST00000260795 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
FGFR3-201ENST00000260795 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
FGFR3-201ENST00000260795 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
FGFR3-201ENST00000260795 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
FGFR3-201ENST00000260795 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
FGFR3-201ENST00000260795 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
FGFR3-201ENST00000260795 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
FGFR3-201ENST00000260795 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
FGFR3-201ENST00000260795 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
FGFR3-201ENST00000260795 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
FGFR3-201ENST00000260795 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
FGFR3-201ENST00000260795 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.93
FGFR3-201ENST00000260795 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
FGFR3-201ENST00000260795 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
FGFR3-201ENST00000260795 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
FGFR3-201ENST00000260795 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
FGFR3-201ENST00000260795 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
FGFR3-201ENST00000260795 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.98
FGFR3-201ENST00000260795 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
FGFR3-201ENST00000260795 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
FGFR3-201ENST00000260795 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
FGFR3-201ENST00000260795 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.04
FGFR3-201ENST00000260795 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
FGFR3-201ENST00000260795 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
FGFR3-201ENST00000260795 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms