RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
RIPK1-201ENST00000259808 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
RIPK1-201ENST00000259808 MT1LQ93083 61 aa5.05□□□□□ -1.6
RIPK1-201ENST00000259808 MT1EP04732 61 aa5□□□□□ -1.61
RIPK1-201ENST00000259808 MUC12Q9UKN1 5478 aa4.95□□□□□ -1.62
RIPK1-201ENST00000259808 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
RIPK1-201ENST00000259808 SPRR2EP22531 72 aa4.93□□□□□ -1.62
RIPK1-201ENST00000259808 SPRR2BP35325 72 aa4.93□□□□□ -1.62
RIPK1-201ENST00000259808 SPRR2AP35326 72 aa4.93□□□□□ -1.62
RIPK1-201ENST00000259808 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
RIPK1-201ENST00000259808 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
RIPK1-201ENST00000259808 SSPOA2VEC9 5147 aa4.83□□□□□ -1.64
RIPK1-201ENST00000259808 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
RIPK1-201ENST00000259808 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
RIPK1-201ENST00000259808 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
RIPK1-201ENST00000259808 MT1MQ8N339 61 aa4.79□□□□□ -1.64
RIPK1-201ENST00000259808 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
RIPK1-201ENST00000259808 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
RIPK1-201ENST00000259808 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
RIPK1-201ENST00000259808 SPRR2DP22532 72 aa4.7□□□□□ -1.66
RIPK1-201ENST00000259808 LCE3EQ5T5B0 92 aa4.65□□□□□ -1.67
RIPK1-201ENST00000259808 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
RIPK1-201ENST00000259808 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
RIPK1-201ENST00000259808 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
RIPK1-201ENST00000259808 LCE2DQ5TA82 110 aaPredicted RBP4.51□□□□□ -1.69
RIPK1-201ENST00000259808 PRM1P04553 51 aa4.49□□□□□ -1.69
RIPK1-201ENST00000259808 MT4P47944 62 aa4.41□□□□□ -1.7
RIPK1-201ENST00000259808 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
RIPK1-201ENST00000259808 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
RIPK1-201ENST00000259808 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
RIPK1-201ENST00000259808 LCE5AQ5TCM9 118 aa4.31□□□□□ -1.72
RIPK1-201ENST00000259808 MT1AP04731 61 aa4.29□□□□□ -1.72
RIPK1-201ENST00000259808 MT3P25713 68 aa4.28□□□□□ -1.72
RIPK1-201ENST00000259808 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
RIPK1-201ENST00000259808 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
RIPK1-201ENST00000259808 MUC19Q7Z5P9 8384 aa4.22□□□□□ -1.73
RIPK1-201ENST00000259808 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
RIPK1-201ENST00000259808 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
RIPK1-201ENST00000259808 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
RIPK1-201ENST00000259808 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
RIPK1-201ENST00000259808 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
RIPK1-201ENST00000259808 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
RIPK1-201ENST00000259808 NEBP20929 6669 aa3.86□□□□□ -1.79
RIPK1-201ENST00000259808 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
RIPK1-201ENST00000259808 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
RIPK1-201ENST00000259808 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
RIPK1-201ENST00000259808 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
RIPK1-201ENST00000259808 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
RIPK1-201ENST00000259808 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
RIPK1-201ENST00000259808 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
RIPK1-201ENST00000259808 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
RIPK1-201ENST00000259808 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
RIPK1-201ENST00000259808 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
RIPK1-201ENST00000259808 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
RIPK1-201ENST00000259808 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
RIPK1-201ENST00000259808 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
RIPK1-201ENST00000259808 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
RIPK1-201ENST00000259808 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
RIPK1-201ENST00000259808 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
RIPK1-201ENST00000259808 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
RIPK1-201ENST00000259808 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
RIPK1-201ENST00000259808 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
RIPK1-201ENST00000259808 KRTAP9-9Q9BYP9 154 aa2.95□□□□□ -1.94
RIPK1-201ENST00000259808 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
RIPK1-201ENST00000259808 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
RIPK1-201ENST00000259808 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
RIPK1-201ENST00000259808 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
RIPK1-201ENST00000259808 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
RIPK1-201ENST00000259808 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
RIPK1-201ENST00000259808 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
RIPK1-201ENST00000259808 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
RIPK1-201ENST00000259808 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
RIPK1-201ENST00000259808 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
RIPK1-201ENST00000259808 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
RIPK1-201ENST00000259808 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
RIPK1-201ENST00000259808 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
RIPK1-201ENST00000259808 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 82.1 ms