RNA–Protein interactions for RNA: ENST00000259241.6

HS6ST1-201, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS6ST1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-201ENST00000259241 MT1EP04732 61 aa4.33□□□□□ -1.72
HS6ST1-201ENST00000259241 SPRR2EP22531 72 aa4.32□□□□□ -1.72
HS6ST1-201ENST00000259241 SPRR2BP35325 72 aa4.32□□□□□ -1.72
HS6ST1-201ENST00000259241 SPRR2AP35326 72 aa4.32□□□□□ -1.72
HS6ST1-201ENST00000259241 KRTAP9-2Q9BYQ4 174 aa4.29□□□□□ -1.72
HS6ST1-201ENST00000259241 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
HS6ST1-201ENST00000259241 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
HS6ST1-201ENST00000259241 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
HS6ST1-201ENST00000259241 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
HS6ST1-201ENST00000259241 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
HS6ST1-201ENST00000259241 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
HS6ST1-201ENST00000259241 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
HS6ST1-201ENST00000259241 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
HS6ST1-201ENST00000259241 MT1MQ8N339 61 aa4.14□□□□□ -1.75
HS6ST1-201ENST00000259241 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
HS6ST1-201ENST00000259241 SPRR2DP22532 72 aa4.13□□□□□ -1.75
HS6ST1-201ENST00000259241 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
HS6ST1-201ENST00000259241 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
HS6ST1-201ENST00000259241 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
HS6ST1-201ENST00000259241 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
HS6ST1-201ENST00000259241 KRTAP9-6A0A140TA67 174 aa3.95□□□□□ -1.78
HS6ST1-201ENST00000259241 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
HS6ST1-201ENST00000259241 MT4P47944 62 aa3.84□□□□□ -1.79
HS6ST1-201ENST00000259241 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
HS6ST1-201ENST00000259241 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
HS6ST1-201ENST00000259241 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
HS6ST1-201ENST00000259241 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
HS6ST1-201ENST00000259241 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
HS6ST1-201ENST00000259241 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
HS6ST1-201ENST00000259241 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
HS6ST1-201ENST00000259241 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
HS6ST1-201ENST00000259241 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
HS6ST1-201ENST00000259241 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
HS6ST1-201ENST00000259241 MT1AP04731 61 aa3.69□□□□□ -1.82
HS6ST1-201ENST00000259241 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
HS6ST1-201ENST00000259241 MT3P25713 68 aa3.65□□□□□ -1.82
HS6ST1-201ENST00000259241 PRM1P04553 51 aa3.62□□□□□ -1.83
HS6ST1-201ENST00000259241 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
HS6ST1-201ENST00000259241 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
HS6ST1-201ENST00000259241 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
HS6ST1-201ENST00000259241 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
HS6ST1-201ENST00000259241 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
HS6ST1-201ENST00000259241 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
HS6ST1-201ENST00000259241 NEBP20929 6669 aa3.34□□□□□ -1.88
HS6ST1-201ENST00000259241 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
HS6ST1-201ENST00000259241 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
HS6ST1-201ENST00000259241 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
HS6ST1-201ENST00000259241 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
HS6ST1-201ENST00000259241 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
HS6ST1-201ENST00000259241 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
HS6ST1-201ENST00000259241 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
HS6ST1-201ENST00000259241 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
HS6ST1-201ENST00000259241 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
HS6ST1-201ENST00000259241 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
HS6ST1-201ENST00000259241 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
HS6ST1-201ENST00000259241 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
HS6ST1-201ENST00000259241 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
HS6ST1-201ENST00000259241 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
HS6ST1-201ENST00000259241 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
HS6ST1-201ENST00000259241 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
HS6ST1-201ENST00000259241 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
HS6ST1-201ENST00000259241 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
HS6ST1-201ENST00000259241 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
HS6ST1-201ENST00000259241 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
HS6ST1-201ENST00000259241 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
HS6ST1-201ENST00000259241 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
HS6ST1-201ENST00000259241 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
HS6ST1-201ENST00000259241 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
HS6ST1-201ENST00000259241 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
HS6ST1-201ENST00000259241 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
HS6ST1-201ENST00000259241 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
HS6ST1-201ENST00000259241 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
HS6ST1-201ENST00000259241 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
HS6ST1-201ENST00000259241 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
HS6ST1-201ENST00000259241 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
HS6ST1-201ENST00000259241 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
HS6ST1-201ENST00000259241 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms