RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
KCTD3-201ENST00000259154 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
KCTD3-201ENST00000259154 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
KCTD3-201ENST00000259154 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
KCTD3-201ENST00000259154 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
KCTD3-201ENST00000259154 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
KCTD3-201ENST00000259154 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.64
KCTD3-201ENST00000259154 MT1LQ93083 61 aa4.83□□□□□ -1.64
KCTD3-201ENST00000259154 MT1EP04732 61 aa4.81□□□□□ -1.64
KCTD3-201ENST00000259154 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
KCTD3-201ENST00000259154 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.65
KCTD3-201ENST00000259154 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
KCTD3-201ENST00000259154 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
KCTD3-201ENST00000259154 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
KCTD3-201ENST00000259154 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.66
KCTD3-201ENST00000259154 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.66
KCTD3-201ENST00000259154 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.66
KCTD3-201ENST00000259154 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
KCTD3-201ENST00000259154 MDN1Q9NU22 5596 aa4.63□□□□□ -1.67
KCTD3-201ENST00000259154 SPRR2EP22531 72 aa4.62□□□□□ -1.67
KCTD3-201ENST00000259154 SPRR2BP35325 72 aa4.62□□□□□ -1.67
KCTD3-201ENST00000259154 SPRR2AP35326 72 aa4.62□□□□□ -1.67
KCTD3-201ENST00000259154 PRM1P04553 51 aa4.58□□□□□ -1.68
KCTD3-201ENST00000259154 MT1MQ8N339 61 aa4.56□□□□□ -1.68
KCTD3-201ENST00000259154 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
KCTD3-201ENST00000259154 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
KCTD3-201ENST00000259154 SPRR2DP22532 72 aa4.42□□□□□ -1.7
KCTD3-201ENST00000259154 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
KCTD3-201ENST00000259154 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
KCTD3-201ENST00000259154 MUC19Q7Z5P9 8384 aa4.29□□□□□ -1.72
KCTD3-201ENST00000259154 KRTAP5-9P26371 169 aa4.27□□□□□ -1.73
KCTD3-201ENST00000259154 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
KCTD3-201ENST00000259154 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
KCTD3-201ENST00000259154 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
KCTD3-201ENST00000259154 MT1AP04731 61 aa4.08□□□□□ -1.76
KCTD3-201ENST00000259154 MT4P47944 62 aa4.06□□□□□ -1.76
KCTD3-201ENST00000259154 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
KCTD3-201ENST00000259154 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
KCTD3-201ENST00000259154 MT3P25713 68 aa3.98□□□□□ -1.77
KCTD3-201ENST00000259154 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.96□□□□□ -1.78
KCTD3-201ENST00000259154 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
KCTD3-201ENST00000259154 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
KCTD3-201ENST00000259154 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
KCTD3-201ENST00000259154 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
KCTD3-201ENST00000259154 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
KCTD3-201ENST00000259154 NEBP20929 6669 aa3.73□□□□□ -1.81
KCTD3-201ENST00000259154 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
KCTD3-201ENST00000259154 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
KCTD3-201ENST00000259154 KRTAP4-6Q9BYQ5 205 aa3.57□□□□□ -1.84
KCTD3-201ENST00000259154 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
KCTD3-201ENST00000259154 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
KCTD3-201ENST00000259154 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
KCTD3-201ENST00000259154 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
KCTD3-201ENST00000259154 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
KCTD3-201ENST00000259154 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
KCTD3-201ENST00000259154 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.88
KCTD3-201ENST00000259154 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
KCTD3-201ENST00000259154 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
KCTD3-201ENST00000259154 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
KCTD3-201ENST00000259154 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
KCTD3-201ENST00000259154 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
KCTD3-201ENST00000259154 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
KCTD3-201ENST00000259154 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.94
KCTD3-201ENST00000259154 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
KCTD3-201ENST00000259154 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
KCTD3-201ENST00000259154 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
KCTD3-201ENST00000259154 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
KCTD3-201ENST00000259154 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.97
KCTD3-201ENST00000259154 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
KCTD3-201ENST00000259154 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
KCTD3-201ENST00000259154 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
KCTD3-201ENST00000259154 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
KCTD3-201ENST00000259154 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
KCTD3-201ENST00000259154 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
KCTD3-201ENST00000259154 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
KCTD3-201ENST00000259154 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
KCTD3-201ENST00000259154 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms