RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 MT1GP13640 62 aa4.16□□□□□ -1.74
USP30-201ENST00000257548 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
USP30-201ENST00000257548 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
USP30-201ENST00000257548 LCE3BQ5TA77 95 aa4.07□□□□□ -1.76
USP30-201ENST00000257548 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
USP30-201ENST00000257548 MT1LQ93083 61 aa4.05□□□□□ -1.76
USP30-201ENST00000257548 KRTAP2-3P0C7H8 128 aa4.05□□□□□ -1.76
USP30-201ENST00000257548 KRTAP2-4Q9BYR9 128 aa4.05□□□□□ -1.76
USP30-201ENST00000257548 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
USP30-201ENST00000257548 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
USP30-201ENST00000257548 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
USP30-201ENST00000257548 MT1EP04732 61 aa3.98□□□□□ -1.77
USP30-201ENST00000257548 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
USP30-201ENST00000257548 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
USP30-201ENST00000257548 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
USP30-201ENST00000257548 KRTAP19-6Q3LI70 58 aa3.78□□□□□ -1.81
USP30-201ENST00000257548 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
USP30-201ENST00000257548 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
USP30-201ENST00000257548 MT1MQ8N339 61 aa3.75□□□□□ -1.81
USP30-201ENST00000257548 PRM1P04553 51 aa3.75□□□□□ -1.81
USP30-201ENST00000257548 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
USP30-201ENST00000257548 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
USP30-201ENST00000257548 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
USP30-201ENST00000257548 KRTAP9-2Q9BYQ4 174 aa3.56□□□□□ -1.84
USP30-201ENST00000257548 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.85
USP30-201ENST00000257548 LCE5AQ5TCM9 118 aa3.48□□□□□ -1.85
USP30-201ENST00000257548 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
USP30-201ENST00000257548 SPRR2EP22531 72 aa3.38□□□□□ -1.87
USP30-201ENST00000257548 SPRR2BP35325 72 aa3.38□□□□□ -1.87
USP30-201ENST00000257548 SPRR2AP35326 72 aa3.38□□□□□ -1.87
USP30-201ENST00000257548 MT1AP04731 61 aa3.35□□□□□ -1.87
USP30-201ENST00000257548 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
USP30-201ENST00000257548 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
USP30-201ENST00000257548 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
USP30-201ENST00000257548 SPRR2DP22532 72 aa3.23□□□□□ -1.89
USP30-201ENST00000257548 KRTAP9-6A0A140TA67 174 aa3.22□□□□□ -1.89
USP30-201ENST00000257548 MT3P25713 68 aa3.2□□□□□ -1.9
USP30-201ENST00000257548 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
USP30-201ENST00000257548 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.9
USP30-201ENST00000257548 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
USP30-201ENST00000257548 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
USP30-201ENST00000257548 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
USP30-201ENST00000257548 MT4P47944 62 aa3.05□□□□□ -1.92
USP30-201ENST00000257548 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
USP30-201ENST00000257548 NEBP20929 6669 aa3.02□□□□□ -1.93
USP30-201ENST00000257548 LCE1DQ5T752 114 aa3.01□□□□□ -1.93
USP30-201ENST00000257548 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
USP30-201ENST00000257548 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
USP30-201ENST00000257548 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
USP30-201ENST00000257548 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
USP30-201ENST00000257548 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
USP30-201ENST00000257548 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
USP30-201ENST00000257548 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
USP30-201ENST00000257548 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
USP30-201ENST00000257548 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
USP30-201ENST00000257548 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
USP30-201ENST00000257548 KRTAP20-1Q3LI63 56 aa2.61□□□□□ -1.99
USP30-201ENST00000257548 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
USP30-201ENST00000257548 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
USP30-201ENST00000257548 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.01
USP30-201ENST00000257548 MUC5BQ9HC84 5762 aaPredicted RBP2.41□□□□□ -2.02
USP30-201ENST00000257548 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
USP30-201ENST00000257548 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
USP30-201ENST00000257548 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
USP30-201ENST00000257548 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
USP30-201ENST00000257548 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
USP30-201ENST00000257548 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
USP30-201ENST00000257548 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
USP30-201ENST00000257548 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
USP30-201ENST00000257548 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
USP30-201ENST00000257548 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
USP30-201ENST00000257548 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
USP30-201ENST00000257548 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
USP30-201ENST00000257548 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
USP30-201ENST00000257548 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
USP30-201ENST00000257548 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
USP30-201ENST00000257548 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms